RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 CNTNAP2Q9UHC6 1331 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 KBTBD13C9JR72 458 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 ATP2A1O14983 1001 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 LPXNO60711 386 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 LRCH4O75427 683 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 RBP3P10745 1247 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 KDSRQ06136 332 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 CRYMQ14894 314 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 GNPTABQ3T906 1256 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 ENOSF1Q7L5Y1 443 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 CLNKQ7Z7G1 428 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 PHF13Q86YI8 300 aaPredicted RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 BBOF1Q8ND07 529 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 WDR60Q8WVS4 1066 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 RNPEPL1Q9HAU8 725 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 IL1RAPL1Q9NZN1 696 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 STARD13Q9Y3M8 1113 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 HTTP42858 3142 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 TPBGLP0DKB5 382 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 PTK7Q13308 1070 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 RCN1Q15293 331 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 BSPRYQ5W0U4 402 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 SPATA18Q8TC71 538 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 RAB3IPQ96QF0 476 aaPredicted RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 CYTH2Q99418 400 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 PCYT2Q99447 389 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 CADM1Q9BY67 442 aaKnown RBP13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 MANSC1Q9H8J5 431 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 BTBD7Q9P203 1132 aa13.74□□□□□ -0.21
SLC48A1-201ENST00000442218 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 ALOX15BO15296 676 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 ARIH2O95376 493 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 MT-ND3P03897 115 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 YARSP54577 528 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 MUM1Q2TAK8 710 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 ZNF699Q32M78 642 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 HSDL1Q3SXM5 330 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 DARS2Q6PI48 645 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 NIPA1Q7RTP0 329 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 UNC5BQ8IZJ1 945 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 EFCAB3Q8N7B9 438 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 DDX50Q9BQ39 737 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 TMEM120AQ9BXJ8 343 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 ADARB2Q9NS39 739 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 IKBKGQ9Y6K9 419 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 DPPA5A6NC42 116 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 CXorf49A8MYA2 514 aaPredicted RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 H7C0C1 242 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 PMM2O15305 246 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 ENO1P06733 434 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 ATP5OP48047 213 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 LRRC36Q1X8D7 754 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 FYB2Q5VWT5 728 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 RINLQ6ZS11 566 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 TMEM35BQ8NCS4 154 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 CGRRF1Q99675 332 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 LPIN3Q9BQK8 851 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 TSSK1BQ9BXA7 367 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 LRMDAQ9H2I8 198 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 PIDD1Q9HB75 910 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 AS3MTQ9HBK9 375 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 PDLIM7Q9NR12 457 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 ACSS2Q9NR19 701 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 WASF2Q9Y6W5 498 aa13.73□□□□□ -0.21
SLC48A1-201ENST00000442218 A0A0B4J269 797 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 MEI4A8MW99 385 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 TCEA3O75764 348 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 CXCL8P10145 99 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 MYL2P10916 166 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 UBA1P22314 1058 aaKnown RBP13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 CALB2P22676 271 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 CRADDP78560 199 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 MORF4L2Q15014 288 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 THEMIS2Q5TEJ8 643 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 VPS52Q8N1B4 723 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 STK32AQ8WU08 396 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 MCUR1Q96AQ8 359 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 CLMNQ96JQ2 1002 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 SMYD3Q9H7B4 428 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 PHIPQ8WWQ0 1821 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 GYG2O15488 501 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 OATP04181 439 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 ERBB2P04626 1255 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 ARL4CP56559 192 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 XKR3Q5GH77 459 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 PPP6R3Q5H9R7 873 aaPredicted RBP13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 EEF1DP3Q658K8 133 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 ZNF677Q86XU0 584 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 AGGF1Q8N302 714 aaeCLIP13.72□□□□□ -0.215e-8■■■■□ 19.9
SLC48A1-201ENST00000442218 ARMC2Q8NEN0 867 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 CCHCR1Q8TD31 782 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 MMP19Q99542 508 aa13.72□□□□□ -0.21
SLC48A1-201ENST00000442218 TEX13BQ9BXU2 312 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms