RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 EPC1Q9H2F5 836 aa20.02■□□□□ 0.8
CCDC78-204ENST00000439619 RBM12Q9NTZ6 932 aaKnown RBP20.02■□□□□ 0.8
CCDC78-204ENST00000439619 TRAF3IP3Q9Y228 551 aa20.02■□□□□ 0.8
CCDC78-204ENST00000439619 TICRRQ7Z2Z1 1910 aa20.02■□□□□ 0.79
CCDC78-204ENST00000439619 MYO15AQ9UKN7 3530 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 MAPK13O15264 365 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 RTN3O95197 1032 aaPredicted RBP20.01■□□□□ 0.79
CCDC78-204ENST00000439619 ABL1P00519 1130 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 SATB1Q01826 763 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 CCINQ13939 588 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 TRIM68Q6AZZ1 485 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 INTS8Q75QN2 995 aaKnown RBP20.01■□□□□ 0.79
CCDC78-204ENST00000439619 CCDC150Q8NCX0 1101 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 PDZD8Q8NEN9 1154 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 SH3RF2Q8TEC5 729 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 DPEP3Q9H4B8 488 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 SMYD3Q9H7B4 428 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 HPS4Q9NQG7 708 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 GMEB2Q9UKD1 530 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 ARHGAP26Q9UNA1 814 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 SMG5Q9UPR3 1016 aaKnown RBP20.01■□□□□ 0.79
CCDC78-204ENST00000439619 COL4A2P08572 1712 aa20.01■□□□□ 0.79
CCDC78-204ENST00000439619 NUP210Q8TEM1 1887 aaPredicted RBP20.01■□□□□ 0.79
CCDC78-204ENST00000439619 C2orf78A6NCI8 922 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 TRDMT1O14717 391 aaKnown RBP20■□□□□ 0.79
CCDC78-204ENST00000439619 ZNF202O95125 648 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 PAPSS2O95340 614 aaPredicted RBP20■□□□□ 0.79
CCDC78-204ENST00000439619 DRD1P21728 446 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 NR2F2P24468 414 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 CNR2P34972 360 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 PIK3CAP42336 1068 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 ID4P47928 161 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 VAMP7P51809 220 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 DPYDQ12882 1025 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 ZNF77Q15935 545 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 ZACNQ401N2 412 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 SCARA5Q6ZMJ2 495 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 KIAA2013Q8IYS2 634 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 NUP93Q8N1F7 819 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 GUF1Q8N442 669 aaKnown RBP20■□□□□ 0.79
CCDC78-204ENST00000439619 CCDC26Q8TAB7 109 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 PLEKHO2Q8TD55 490 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 ZNF518BQ9C0D4 1074 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 RMND1Q9NWS8 449 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 GCNT4Q9P109 453 aa20■□□□□ 0.79
CCDC78-204ENST00000439619 ZNF840PA6NDX5 716 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 NFATC1O95644 943 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 ARSAP15289 507 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 TCF3P15923 654 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 YWHAQP27348 245 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 CDH8P55286 799 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 DLG4P78352 724 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 FOXK2Q01167 660 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 USP4Q13107 963 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 NFIL3Q16649 462 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 FBXO43Q4G163 708 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 TMEM196Q5HYL7 178 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 Q6ZS52 159 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 SV2AQ7L0J3 742 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 LONP2Q86WA8 852 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 SMARCD1Q96GM5 515 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 CHAMP1Q96JM3 812 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 SLC22A12Q96S37 553 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 P2RY13Q9BPV8 354 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 B3GNT5Q9BYG0 378 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 ECT2Q9H8V3 914 aa19.99■□□□□ 0.79
CCDC78-204ENST00000439619 DMAP1Q9NPF5 467 aaPredicted RBP19.99■□□□□ 0.79
CCDC78-204ENST00000439619 PATJQ8NI35 1801 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 PRR29P0C7W0 189 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 TDGF1P13385 188 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 PSMC2P35998 433 aaKnown RBP19.98■□□□□ 0.79
CCDC78-204ENST00000439619 USP46P62068 366 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 NUCB2P80303 420 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 ENPEPQ07075 957 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 IFRD2Q12894 506 aaPredicted RBP19.98■□□□□ 0.79
CCDC78-204ENST00000439619 TAF10Q12962 218 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 GAS6Q14393 721 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 UNC93AQ86WB7 457 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 DDX42Q86XP3 938 aaKnown RBP eCLIP19.98■□□□□ 0.79
CCDC78-204ENST00000439619 FAM186BQ8IYM0 893 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 KIAA1958Q8N8K9 716 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 OVCA2Q8WZ82 227 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 HOOK1Q9UJC3 728 aaKnown RBP19.98■□□□□ 0.79
CCDC78-204ENST00000439619 MAPK8IP1Q9UQF2 711 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 NME7Q9Y5B8 376 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 WNT6Q9Y6F9 365 aa19.98■□□□□ 0.79
CCDC78-204ENST00000439619 VPS13AQ96RL7 3174 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 CLDN5O00501 218 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 SLC9A3R1O14745 358 aaPredicted RBP19.97■□□□□ 0.79
CCDC78-204ENST00000439619 VNN1O95497 513 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 GJA4P35212 333 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 RAP1GAPP47736 663 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 SLC7A9P82251 487 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 ADAM9Q13443 819 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 PRR23BQ6ZRT6 265 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 FAM35AQ86V20 835 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 FBXO32Q969P5 355 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 COMMD8Q9NX08 183 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 SLC8A2Q9UPR5 921 aa19.97■□□□□ 0.79
CCDC78-204ENST00000439619 RIF1Q5UIP0 2472 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms