RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 IRX4P78413 519 aa12.09□□□□□ -0.47
TRAPPC9-202ENST00000438773 SLC29A2Q14542 456 aa12.09□□□□□ -0.47
TRAPPC9-202ENST00000438773 KIF2BQ8N4N8 673 aa12.09□□□□□ -0.47
TRAPPC9-202ENST00000438773 EPAS1Q99814 870 aa12.09□□□□□ -0.47
TRAPPC9-202ENST00000438773 NEUROG2Q9H2A3 272 aa12.09□□□□□ -0.47
TRAPPC9-202ENST00000438773 PCDHA3Q9Y5H8 950 aa12.09□□□□□ -0.47
TRAPPC9-202ENST00000438773 IQANK1A0A1B0GTG1 560 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 TYW5A2RUC4 315 aaKnown RBP12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 KRT37O76014 449 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 PAEPP09466 180 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 NCAM1P13591 858 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 ACAT1P24752 427 aaKnown RBP12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 HSD17B3P37058 310 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 SEPT6Q14141 434 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 PALB2Q86YC2 1186 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 NT5DC4Q86YG4 428 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 CYTH2Q99418 400 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 APBA2Q99767 749 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 DDX23Q9BUQ8 820 aaKnown RBP12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 GPATCH2LQ9NWQ4 482 aa12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.08□□□□□ -0.47
TRAPPC9-202ENST00000438773 SKAP2O75563 359 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 POMCP01189 267 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 AXLP30530 894 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 AADACL2Q6P093 401 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 RAPH1Q70E73 1250 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 TRMT10CQ7L0Y3 403 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 SDCCAG8Q86SQ7 713 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 HELQQ8TDG4 1101 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 FAM172AQ8WUF8 416 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 SCYL1Q96KG9 808 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 PLEKHA5Q9HAU0 1116 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 DONSONQ9NYP3 566 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 TNRC6CQ9HCJ0 1690 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 CES2O00748 559 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 FAM71DQ8N9W8 422 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 RAB3IL1Q8TBN0 382 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 GAD1Q99259 594 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 TRIM62Q9BVG3 475 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 STARD7Q9NQZ5 370 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 USP18Q9UMW8 372 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 MICAL2O94851 1124 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 RARAP10276 462 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 LONRF1Q17RB8 773 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 FAM117BQ6P1L5 589 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 SPATS2Q86XZ4 545 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 PCDHB18PQ96TA0 734 aa12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 G3BP2Q9UN86 482 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-202ENST00000438773 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 BTNL10A8MVZ5 291 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 M0QYT0 321 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 OPHN1O60890 802 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 SLC4A1P02730 911 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 MMP3P08254 477 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 ODC1P11926 461 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 SKIP12755 728 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 YBX3P16989 372 aaKnown RBP eCLIP12.07□□□□□ -0.485e-6■■■□□ 19.1
TRAPPC9-202ENST00000438773 DENND1BQ6P3S1 775 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 DDIT4Q9NX09 232 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 F8VP50 259 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 PPP1R12AO14974 1030 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 FSBPO95073 299 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 MARCKSL1P49006 195 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 PPM1FP49593 454 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 MCL1Q07820 350 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 KLHL38Q2WGJ6 581 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 SPOCD1Q6ZMY3 1216 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 FAM131BQ86XD5 332 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 PPP4R1Q8TF05 950 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 SPDL1Q96EA4 605 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 CCDC97Q96F63 343 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 AGAP3Q96P47 875 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 ALG13Q9NP73 1137 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 SIX2Q9NPC8 291 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 SMYD2Q9NRG4 433 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 ABI2Q9NYB9 513 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 FNDC3AQ9Y2H6 1198 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 APOEP02649 317 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 C4BPAP04003 597 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 FLT3LGP49771 235 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 APLP1P51693 650 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 COG7P83436 770 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 OTUD4Q01804 1114 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 ZNF268Q14587 947 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 STAT4Q14765 748 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 SCUBE3Q8IX30 993 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 ACTL9Q8TC94 416 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 BFARQ9NZS9 450 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 DCTN4Q9UJW0 460 aa12.07□□□□□ -0.48
TRAPPC9-202ENST00000438773 CA12O43570 354 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 HMGCRP04035 888 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 RPLP2P05387 115 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 SERPINB6P35237 376 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 JAM2P57087 298 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 SESN2P58004 480 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms