RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 EFNA5P52803 228 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 MRPL58Q14197 206 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 PPP2R5AQ15172 486 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 ALKBH2Q6NS38 261 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 UNQ6494/PRO21346Q6UXR6 183 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 PIK3AP1Q6ZUJ8 805 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 HAUS6Q7Z4H7 955 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 C3orf58Q8NDZ4 430 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 PIGOQ8TEQ8 1089 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 UBASH3BQ8TF42 649 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 GAB3Q8WWW8 586 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 CCDC113Q9H0I3 377 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 CXCL16Q9H2A7 254 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 SLITRK6Q9H5Y7 841 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 TOPORSQ9NS56 1045 aaPredicted RBP9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 CEP72Q9P209 647 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 AFF4Q9UHB7 1163 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 RALYQ9UKM9 306 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 SOX13Q9UN79 622 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 KCNJ14Q9UNX9 436 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 GDAQ9Y2T3 454 aa9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 PDCD11Q14690 1871 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-208ENST00000436412 ASH1LQ9NR48 2969 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 BPTFQ12830 3046 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 SMIM28A0A1B0GU29 152 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 SPECC1L-ADORA2AF8WAN1 911 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 I3L4J1 428 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 PDE2AO00408 941 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 EREGO14944 169 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 ATG13O75143 517 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 TNFRSF21O75509 655 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 CDKL5O76039 1030 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 SEC24AO95486 1093 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 MYL4P12829 197 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 ATP2B1P20020 1258 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 IGFBP6P24592 240 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 PI4KAP42356 2102 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 NAMPTP43490 491 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 BRCC3P46736 316 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 YARSP54577 528 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 ARPP19P56211 112 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 PLD1Q13393 1074 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 PTPAQ15257 358 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 SF3A2Q15428 464 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 ARHGAP29Q52LW3 1261 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 XKR4Q5GH76 650 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 GLRA4Q5JXX5 417 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 LCE3BQ5TA77 95 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 ZNF280DQ6N043 979 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 Q6ZS52 159 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 ABCA7Q8IZY2 2146 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 APPL2Q8NEU8 664 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 FAM46AQ96IP4 442 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 ZC3H10Q96K80 434 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 AIFM3Q96NN9 605 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 TTC12Q9H892 705 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 GPRC5CQ9NQ84 441 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 VPS45Q9NRW7 570 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 RBM12Q9NTZ6 932 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 OBP2AQ9NY56 170 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 FBXL5Q9UKA1 691 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 TPCN1Q9ULQ1 816 aa9.18□□□□□ -0.94
NIF3L1-208ENST00000436412 CITO14578 2027 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 SLC38A8A6NNN8 435 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 PODXLO00592 558 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 FGF19O95750 216 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 CCDC192P0DO97 292 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 MPLP40238 635 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 TWF1Q12792 350 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 TOB2Q14106 344 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 TEAD2Q15562 447 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 CALCRLQ16602 461 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 CTXN3Q4LDR2 81 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 ATF7IP2Q5U623 682 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 EEF1DP3Q658K8 133 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 RNF43Q68DV7 783 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 ALKAL1Q6UXT8 129 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 RUFY3Q7L099 469 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 MAEAQ7L5Y9 396 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 KBTBD6Q86V97 674 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 ARID3BQ8IVW6 561 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 CAMKK1Q8N5S9 505 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 TMEM102Q8N9M5 508 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 BEST2Q8NFU1 509 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 DEPTORQ8TB45 409 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 SHKBP1Q8TBC3 707 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 PMEPA1Q969W9 287 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 IFT74Q96LB3 600 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 CCDC94Q9BW85 323 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 GOLGA2P5Q9HBQ8 144 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 TUFT1Q9NNX1 390 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 RXFP3Q9NSD7 469 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 FOXD3Q9UJU5 478 aaPredicted RBP9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 RAXQ9Y2V3 346 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 ASB3Q9Y575 518 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 NUB1Q9Y5A7 615 aa9.17□□□□□ -0.94
NIF3L1-208ENST00000436412 STK36Q9NRP7 1315 aa9.16□□□□□ -0.94
NIF3L1-208ENST00000436412 FAM13AO94988 1023 aa9.16□□□□□ -0.94
NIF3L1-208ENST00000436412 C1QTNF9P0C862 333 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms