RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 M0QYV0 167 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 XPOTO43592 962 aaKnown RBP13.48□□□□□ -0.25
DDX56-204ENST00000431640 CAND2O75155 1236 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 CAPN15O75808 1086 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 TTC4O95801 387 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 CD4P01730 458 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 SHBGP04278 402 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 ITGAVP06756 1048 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 KRT10P13645 584 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 DARSP14868 501 aaKnown RBP13.48□□□□□ -0.25
DDX56-204ENST00000431640 DESP17661 470 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 KLRC2P26717 231 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 ATP5DP30049 168 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 HOXA11P31270 313 aaPredicted RBP13.48□□□□□ -0.25
DDX56-204ENST00000431640 PCK1P35558 622 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 NDST1P52848 882 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 GUCY1A3Q02108 690 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 ZBTB6Q15916 424 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 PTGISQ16647 500 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 KAZNQ674X7 775 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 TAOK1Q7L7X3 1001 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 SESTD1Q86VW0 696 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 UNC93AQ86WB7 457 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 C7orf31Q8N865 590 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 SLC43A3Q8NBI5 491 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 NKD2Q969F2 451 aaPredicted RBP13.48□□□□□ -0.25
DDX56-204ENST00000431640 SNX27Q96L92 541 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 SERPINB12Q96P63 405 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 CCDC77Q9BR77 488 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 TRMT13Q9NUP7 481 aaKnown RBP13.48□□□□□ -0.25
DDX56-204ENST00000431640 TLDC2A0PJX2 215 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 NDUFAB1O14561 156 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 TP73O15350 636 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 LRCH4O75427 683 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 TCEA3O75764 348 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 ERBB2P04626 1255 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 GNAT1P11488 350 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 FGFR4P22455 802 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 KDELR1P24390 212 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 VCPP55072 806 aaKnown RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 SLC25A11Q02978 314 aaKnown RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 TMEM62Q0P6H9 643 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 TAZQ16635 292 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 SKIDA1Q1XH10 827 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 FAM47CQ5HY64 1035 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 IZUMO3Q5VZ72 239 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 TTC19Q6DKK2 380 aaPredicted RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 HIBCHQ6NVY1 386 aaPredicted RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 ALLCQ8N6M5 410 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 JOSD2Q8TAC2 188 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 RAPGEF5Q92565 580 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 OSBPL7Q9BZF2 842 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 TRIM6Q9C030 488 aaPredicted RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 FAM49AQ9H0Q0 323 aaPredicted RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 CDC42EP4Q9H3Q1 356 aaKnown RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 CDHR5Q9HBB8 845 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 METTL5Q9NRN9 209 aaKnown RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 SNTG2Q9NY99 539 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 SLC12A6Q9UHW9 1150 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 UBQLN1Q9UMX0 589 aaKnown RBP13.47□□□□□ -0.25
DDX56-204ENST00000431640 CITO14578 2027 aa13.47□□□□□ -0.25
DDX56-204ENST00000431640 GMNCA6NCL1 334 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 KBTBD13C9JR72 458 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 GPD1P21695 349 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 GJA8P48165 433 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 ZNF143P52747 638 aaPredicted RBP13.46□□□□□ -0.25
DDX56-204ENST00000431640 TRIP13Q15645 432 aaPredicted RBP13.46□□□□□ -0.25
DDX56-204ENST00000431640 KCTD19Q17RG1 926 aaPredicted RBP13.46□□□□□ -0.25
DDX56-204ENST00000431640 ALKAL1Q6UXT8 129 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 ANKS1BQ7Z6G8 1248 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 ZDHHC17Q8IUH5 632 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 ZCCHC9Q8N567 271 aaKnown RBP13.46□□□□□ -0.25
DDX56-204ENST00000431640 KCTD6Q8NC69 237 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 ARRDC4Q8NCT1 418 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 CMASQ8NFW8 434 aaPredicted RBP13.46□□□□□ -0.25
DDX56-204ENST00000431640 STK32AQ8WU08 396 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 DNAJB3Q8WWF6 145 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 CNPY3Q9BT09 278 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 AAASQ9NRG9 546 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 CNTN3Q9P232 1028 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 HMGXB4Q9UGU5 601 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 TSPAN16Q9UKR8 245 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 DNPEPQ9ULA0 475 aa13.46□□□□□ -0.25
DDX56-204ENST00000431640 TPX2Q9ULW0 747 aaKnown RBP13.46□□□□□ -0.25
DDX56-204ENST00000431640 C3orf70A6NLC5 250 aaPredicted RBP13.45□□□□□ -0.26
DDX56-204ENST00000431640 SMAPO00193 183 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 DNALI1O14645 258 aaPredicted RBP13.45□□□□□ -0.26
DDX56-204ENST00000431640 CABYRO75952 493 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 TRUB2O95900 331 aaKnown RBP13.45□□□□□ -0.26
DDX56-204ENST00000431640 COL6A1P12109 1028 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 TCF4P15884 667 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 PNPLA4P41247 253 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 PLCB3Q01970 1234 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 ORC1Q13415 861 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 MORF4L2Q15014 288 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 TRIM71Q2Q1W2 868 aaKnown RBP13.45□□□□□ -0.26
DDX56-204ENST00000431640 P3H1Q32P28 736 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms