RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SIX2Q9NPC8 291 aa7.91□□□□□ -1.14
LINC01049-201ENST00000426840 CRTAC1Q9NQ79 661 aa7.91□□□□□ -1.14
LINC01049-201ENST00000426840 CLDND1Q9NY35 253 aa7.91□□□□□ -1.14
LINC01049-201ENST00000426840 AFF4Q9UHB7 1163 aaKnown RBP7.91□□□□□ -1.14
LINC01049-201ENST00000426840 FBXW11Q9UKB1 542 aa7.91□□□□□ -1.14
LINC01049-201ENST00000426840 GTF3C4Q9UKN8 822 aa7.91□□□□□ -1.14
LINC01049-201ENST00000426840 CDH9Q9ULB4 789 aa7.91□□□□□ -1.14
LINC01049-201ENST00000426840 BARX2Q9UMQ3 279 aaPredicted RBP7.91□□□□□ -1.14
LINC01049-201ENST00000426840 TRANK1O15050 2925 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 TSC2P49815 1807 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CDC14CA4D256 554 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 MTMR11A4FU01 709 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 BECN2A8MW95 431 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CILPO75339 1184 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CPB1P15086 417 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 PTPN1P18031 435 aaKnown RBP7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.14
LINC01049-201ENST00000426840 PCSK1P29120 753 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CDR1P51861 262 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 NDST1P52848 882 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 APBA1Q02410 837 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 ADCY1Q08828 1119 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 INCA1Q0VD86 236 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CETN1Q12798 172 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 SMARCB1Q12824 385 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 DUSP4Q13115 394 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CUL2Q13617 745 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 TLR1Q15399 786 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 EXOC3L4Q17RC7 722 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CCDC142Q17RM4 750 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 UVSSAQ2YD98 709 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 SLC39A12Q504Y0 691 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 TMEM214Q6NUQ4 689 aaKnown RBP7.9□□□□□ -1.14
LINC01049-201ENST00000426840 GJB7Q6PEY0 223 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 EP400NLQ6ZTU2 488 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 UNC93AQ86WB7 457 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 TCEAL8Q8IYN2 117 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 DCP1BQ8IZD4 617 aaKnown RBP7.9□□□□□ -1.14
LINC01049-201ENST00000426840 ATAD1Q8NBU5 361 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CCDC150Q8NCX0 1101 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.9□□□□□ -1.14
LINC01049-201ENST00000426840 FAM200AQ8TCP9 573 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 KAT5Q92993 513 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 KREMEN1Q96MU8 473 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 NT5C1BQ96P26 610 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 PGLYRP2Q96PD5 576 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 TWNKQ96RR1 684 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 SYT15Q9BQS2 421 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 ELOVL4Q9GZR5 314 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 TSPY26PQ9H489 355 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 DPEP3Q9H4B8 488 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 MAN1C1Q9NR34 630 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CISHQ9NSE2 258 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 MAFFQ9ULX9 164 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 COG5Q9UP83 839 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 PCDHGA11Q9Y5H2 935 aa7.9□□□□□ -1.14
LINC01049-201ENST00000426840 CCDC195A0A1B0GUA6 201 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 H3BQ06 376 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 RNF225M0QZC1 329 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 TEX33O43247 280 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 RFPL2O75678 378 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 HAPLN1P10915 354 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 HOXB8P17481 243 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 ACO1P21399 889 aaKnown RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 KCNA5P22460 613 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 TBXAS1P24557 533 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 ELF1P32519 619 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 RAD23BP54727 409 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 PSMC1P62191 440 aaKnown RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 TSPY1Q01534 308 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 LEXMQ3ZCV2 418 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 TRIM65Q6PJ69 517 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 RIPOR1Q6ZS17 1223 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 PAQR9Q6ZVX9 377 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 RTL10Q7L3V2 364 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 RRAGAQ7L523 313 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 ACOT1Q86TX2 421 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 TTC9BQ8N6N2 239 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 CMASQ8NFW8 434 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 SPPL2BQ8TCT7 592 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 ZNF707Q96C28 371 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 NAP1L5Q96NT1 182 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 B3GNT5Q9BYG0 378 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 FAM124BQ9H5Z6 455 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 CYP4F11Q9HBI6 524 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 UBE2TQ9NPD8 197 aaPredicted RBP7.89□□□□□ -1.15
LINC01049-201ENST00000426840 DZANK1Q9NVP4 752 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 GCNT4Q9P109 453 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 HSFX1Q9UBD0 423 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 HMGXB4Q9UGU5 601 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 DPP7Q9UHL4 492 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 CNTN6Q9UQ52 1028 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 SIK3Q9Y2K2 1263 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 PCDHB5Q9Y5E4 795 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 HRH3Q9Y5N1 445 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 DOCK6Q96HP0 2047 aa7.89□□□□□ -1.15
LINC01049-201ENST00000426840 LGALS16A8MUM7 142 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 CLDN5O00501 218 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 MBTPS2O43462 519 aa7.88□□□□□ -1.15
LINC01049-201ENST00000426840 SOAT2O75908 522 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms