RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 SPAG17Q6Q759 2223 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 SOBPA7XYQ1 873 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 ABL1P00519 1130 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 EGFP01133 1207 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 PTPN1P18031 435 aaKnown RBP16.57■□□□□ 0.24
ACTB-202ENST00000414620 HDCP19113 662 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 CDH8P55286 799 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 KRT85P78386 507 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 PDGFRLQ15198 375 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 ZNF699Q32M78 642 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 SH3RF2Q8TEC5 729 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 XYLT2Q9H1B5 865 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 TMEM30AQ9NV96 361 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 RAB23Q9ULC3 237 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 USP18Q9UMW8 372 aa16.57■□□□□ 0.24
ACTB-202ENST00000414620 SPTBN4Q9H254 2564 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 NR3C1P04150 777 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 CMA1P23946 247 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 ATICP31939 592 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 GJA4P35212 333 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 SYKP43405 635 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 DLG4P78352 724 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 GRSF1Q12849 480 aaKnown RBP eCLIP16.56■□□□□ 0.246e-7■□□□□ 10
ACTB-202ENST00000414620 TMEM196Q5HYL7 178 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 CEP135Q66GS9 1140 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 CPA6Q8N4T0 437 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 B3GALNT2Q8NCR0 500 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 GOLGA5Q8TBA6 731 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 PARD3BQ8TEW8 1205 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 OSCP1Q8WVF1 389 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 B3GNT5Q9BYG0 378 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 SDCBP2Q9H190 292 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 KCTD10Q9H3F6 313 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 ECT2Q9H8V3 914 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 FBRSL1Q9HCM7 1045 aaKnown RBP16.56■□□□□ 0.24
ACTB-202ENST00000414620 POLR3BQ9NW08 1133 aaPredicted RBP16.56■□□□□ 0.24
ACTB-202ENST00000414620 TRPM5Q9NZQ8 1165 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 HPSEQ9Y251 543 aa16.56■□□□□ 0.24
ACTB-202ENST00000414620 GPR179Q6PRD1 2367 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 TRDMT1O14717 391 aaKnown RBP16.55■□□□□ 0.24
ACTB-202ENST00000414620 SCAMP3O14828 347 aaKnown RBP16.55■□□□□ 0.24
ACTB-202ENST00000414620 HRO43593 1189 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 RNF40O75150 1001 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 VNN1O95497 513 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 STAU1O95793 577 aaKnown RBP16.55■□□□□ 0.24
ACTB-202ENST00000414620 C4BPAP04003 597 aaKnown RBP16.55■□□□□ 0.24
ACTB-202ENST00000414620 RPN1P04843 607 aaKnown RBP16.55■□□□□ 0.24
ACTB-202ENST00000414620 PXNP49023 591 aaPredicted RBP16.55■□□□□ 0.24
ACTB-202ENST00000414620 GALK1P51570 392 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 NDUFA8P51970 172 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 SPEM2Q0P670 501 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 PSMD2Q13200 908 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 NCOA4Q13772 614 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 SIM2Q14190 667 aaPredicted RBP16.55■□□□□ 0.24
ACTB-202ENST00000414620 RSPO4Q2I0M5 234 aaPredicted RBP16.55■□□□□ 0.24
ACTB-202ENST00000414620 EML3Q32P44 896 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 ZNF667Q5HYK9 610 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 LONP2Q86WA8 852 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 SYNPOQ8N3V7 929 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 C8orf48Q96LL4 319 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 MED10Q9BTT4 135 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 ELOVL4Q9GZR5 314 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 PARD6AQ9NPB6 346 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.55■□□□□ 0.248e-9■■■■■ 39.5
ACTB-202ENST00000414620 DMAC2Q9NW81 257 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 ARHGAP26Q9UNA1 814 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
ACTB-202ENST00000414620 PAPSS2O95340 614 aaPredicted RBP16.54■□□□□ 0.24
ACTB-202ENST00000414620 ZXDBP98169 803 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 AMPD2Q01433 879 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 TAF10Q12962 218 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 ORC1Q13415 861 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
ACTB-202ENST00000414620 ATP2A3Q93084 1043 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 P2RY13Q9BPV8 354 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 TTLL2Q9BWV7 592 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 LINC00597Q9H2U6 94 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 SMPD4Q9NXE4 827 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 USP25Q9UHP3 1055 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 MAPK8IP1Q9UQF2 711 aa16.54■□□□□ 0.24
ACTB-202ENST00000414620 DCHS1Q96JQ0 3298 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 ZNF840PA6NDX5 716 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 LEFTY2O00292 366 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 FAM163BP0C2L3 166 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 PDE6CP51160 858 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 AP3M2P53677 418 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 NOP14P78316 857 aaKnown RBP16.53■□□□□ 0.24
ACTB-202ENST00000414620 LAIR1Q6GTX8 287 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 SPOPLQ6IQ16 392 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 CEP68Q76N32 757 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 ERMP1Q7Z2K6 904 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 DGLUCYQ7Z3D6 616 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 FAM35AQ86V20 835 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 SLC9A9Q8IVB4 645 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 CD101Q93033 1021 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 CEP295NLQ96MC4 621 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 KCNK16Q96T55 309 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 RNF38Q9H0F5 515 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 VRTNQ9H8Y1 702 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms