RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 RESP18Q5W5W9 173 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 FAM160A2Q8N612 972 aaPredicted RBP20.52■□□□□ 0.88
CPSF7-204ENST00000413232 SH3RF2Q8TEC5 729 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 FNBP1Q96RU3 617 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 XYLT2Q9H1B5 865 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 UBE4BO95155 1302 aa20.52■□□□□ 0.87
CPSF7-204ENST00000413232 LAMA1P25391 3075 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 DCDC2BA2VCK2 349 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 PRR5-ARHGAP8B1AHC4 643 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 F8VP50 259 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 KLRC4O43908 158 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 TACC1O75410 805 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 ARHGAP8P85298 464 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 WDR72Q3MJ13 1102 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 DENND5BQ6ZUT9 1274 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 OR6B3Q8NGW1 331 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 P2RY13Q9BPV8 354 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 TTLL2Q9BWV7 592 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 RNF38Q9H0F5 515 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 SEMA4GQ9NTN9 838 aa20.51■□□□□ 0.87
CPSF7-204ENST00000413232 CLDN5O00501 218 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 PTPN1P18031 435 aaKnown RBP20.5■□□□□ 0.87
CPSF7-204ENST00000413232 ME1P48163 572 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 DNM1Q05193 864 aaKnown RBP20.5■□□□□ 0.87
CPSF7-204ENST00000413232 MAPRE1Q15691 268 aaKnown RBP20.5■□□□□ 0.87
CPSF7-204ENST00000413232 KNOP1Q1ED39 458 aaKnown RBP20.5■□□□□ 0.87
CPSF7-204ENST00000413232 GAB4Q2WGN9 574 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 HS2ST1Q7LGA3 356 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.5■□□□□ 0.87
CPSF7-204ENST00000413232 C12orf56Q8IXR9 622 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 CPA6Q8N4T0 437 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 FSIP1Q8NA03 581 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 SPRYD3Q8NCJ5 442 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 CHAMP1Q96JM3 812 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 ZNF518BQ9C0D4 1074 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 SNX25Q9H3E2 840 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 MAGEF1Q9HAY2 307 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 SERTAD1Q9UHV2 236 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 CDV3Q9UKY7 258 aaKnown RBP20.5■□□□□ 0.87
CPSF7-204ENST00000413232 ARHGAP26Q9UNA1 814 aa20.5■□□□□ 0.87
CPSF7-204ENST00000413232 PVALEFA0A1B0GWK0 134 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 ZNF840PA6NDX5 716 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 GDF9O60383 454 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 TCF3P15923 654 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 DRD1P21728 446 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 IFNAR2P48551 515 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 CDH8P55286 799 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 SNRPFP62306 86 aaKnown RBP20.49■□□□□ 0.87
CPSF7-204ENST00000413232 STK4Q13043 487 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 KCNB1Q14721 858 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 CEP68Q76N32 757 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 KIAA0895Q8NCT3 520 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 B3GNT5Q9BYG0 378 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 NXF1Q9UBU9 619 aaKnown RBP20.49■□□□□ 0.87
CPSF7-204ENST00000413232 RCOR1Q9UKL0 485 aa20.49■□□□□ 0.87
CPSF7-204ENST00000413232 NUP205Q92621 2012 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 SCAMP3O14828 347 aaKnown RBP20.48■□□□□ 0.87
CPSF7-204ENST00000413232 ACTN4O43707 911 aaKnown RBP20.48■□□□□ 0.87
CPSF7-204ENST00000413232 LRP3O75074 770 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 STAU1O95793 577 aaKnown RBP20.48■□□□□ 0.87
CPSF7-204ENST00000413232 NOP14P78316 857 aaKnown RBP20.48■□□□□ 0.87
CPSF7-204ENST00000413232 CCDC6Q16204 474 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 CSRP2Q16527 193 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 TDRD10Q5VZ19 366 aaKnown RBP20.48■□□□□ 0.87
CPSF7-204ENST00000413232 PRR23CQ6ZRP0 262 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 KBTBD6Q86V97 674 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 RPLP0P6Q8NHW5 317 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 GAB3Q8WWW8 586 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 CD101Q93033 1021 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 ATP2A3Q93084 1043 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 C8orf48Q96LL4 319 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 HHIPQ96QV1 700 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 SMYD3Q9H7B4 428 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 FAM13BQ9NYF5 915 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 TRPM5Q9NZQ8 1165 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 SLC8A2Q9UPR5 921 aa20.48■□□□□ 0.87
CPSF7-204ENST00000413232 THADAQ6YHU6 1953 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.47■□□□□ 0.87
CPSF7-204ENST00000413232 LEFTY2O00292 366 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 TRIM66O15016 1216 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 AXIN1O15169 862 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 EXOC3O60645 756 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 ATG13O75143 517 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 FAM163BP0C2L3 166 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 ANXA13P27216 316 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 OPRD1P41143 372 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 RAP1GAPP47736 663 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 TNNC1P63316 161 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 AMPD2Q01433 879 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 TAF10Q12962 218 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 PAQR9Q6ZVX9 377 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 B3GALNT2Q8NCR0 500 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 PARD3BQ8TEW8 1205 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 PAGE5Q96GU1 130 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 CEP295NLQ96MC4 621 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 RTKNQ9BST9 563 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 SDCBP2Q9H190 292 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 DMAC2Q9NW81 257 aa20.47■□□□□ 0.87
CPSF7-204ENST00000413232 CCDC163A0A0D9SF12 145 aa20.46■□□□□ 0.87
CPSF7-204ENST00000413232 LRRIQ3A6PVS8 624 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms