RNA–Protein interactions for RNA: ENST00000412562.1

PHBP3-201, Transcript of prohibitin pseudogene 3, humanhuman

BASIC

Gene PHBP3, Length 819 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP3-201ENST00000412562 SPATA17Q96L03 361 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 ECT2Q9H8V3 914 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 DLL3Q9NYJ7 618 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 USP18Q9UMW8 372 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 CNOT1A5YKK6 2376 aaKnown RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 EPG5Q9HCE0 2579 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 CHD8Q9HCK8 2581 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 GREB1Q4ZG55 1949 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 ANAPC1Q9H1A4 1944 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 SOBPA7XYQ1 873 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 A8MXQ7 604 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 RNF40O75150 1001 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 PAPSS2O95340 614 aaPredicted RBP13.14□□□□□ -0.31
PHBP3-201ENST00000412562 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 TNNC1P63316 161 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 GRSF1Q12849 480 aaKnown RBP eCLIP13.14□□□□□ -0.31
PHBP3-201ENST00000412562 ORC1Q13415 861 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 TRPC3Q13507 836 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 PPP2R5DQ14738 602 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 PDGFRLQ15198 375 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 EML3Q32P44 896 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 VSTM1Q6UX27 236 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 SCARA5Q6ZMJ2 495 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 ERMP1Q7Z2K6 904 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 DGLUCYQ7Z3D6 616 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 CEP57L1Q8IYX8 460 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 SYNPOQ8N3V7 929 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 OSCP1Q8WVF1 389 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 KCNK16Q96T55 309 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 P2RY13Q9BPV8 354 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 KCTD10Q9H3F6 313 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 KIF9Q9HAQ2 790 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.14□□□□□ -0.31
PHBP3-201ENST00000412562 DMAC2Q9NW81 257 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
PHBP3-201ENST00000412562 ZNF840PA6NDX5 716 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 PHACTR2O75167 634 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 ABL1P00519 1130 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 C4BPAP04003 597 aaKnown RBP13.13□□□□□ -0.31
PHBP3-201ENST00000412562 SNRPFP62306 86 aaKnown RBP13.13□□□□□ -0.31
PHBP3-201ENST00000412562 FOXK2Q01167 660 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 IFRD2Q12894 506 aaPredicted RBP13.13□□□□□ -0.31
PHBP3-201ENST00000412562 TAF10Q12962 218 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 BIRC3Q13489 604 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 KCNB1Q14721 858 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 MAPRE1Q15691 268 aaKnown RBP13.13□□□□□ -0.31
PHBP3-201ENST00000412562 C1orf220Q5T0J3 134 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 LAIR1Q6GTX8 287 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 PAQR9Q6ZVX9 377 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 C8orf48Q96LL4 319 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 TRPM5Q9NZQ8 1165 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 GMEB2Q9UKD1 530 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 HPSEQ9Y251 543 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
PHBP3-201ENST00000412562 PTPRDP23468 1912 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 ACACBO00763 2458 aa13.13□□□□□ -0.31
PHBP3-201ENST00000412562 LEFTY2O00292 366 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 TRIM66O15016 1216 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 STAU1O95793 577 aaKnown RBP13.12□□□□□ -0.31
PHBP3-201ENST00000412562 CMA1P23946 247 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 ANXA13P27216 316 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 IFNAR2P48551 515 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 NDUFA8P51970 172 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 ATXN1P54253 815 aaKnown RBP13.12□□□□□ -0.31
PHBP3-201ENST00000412562 MESP2Q0VG99 397 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 NCOA4Q13772 614 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 PUM1Q14671 1186 aaKnown RBP eCLIP13.12□□□□□ -0.31
PHBP3-201ENST00000412562 CCDC6Q16204 474 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 ZNF699Q32M78 642 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 SPOPLQ6IQ16 392 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 SFTPA1Q8IWL2 248 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 B3GALNT2Q8NCR0 500 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 SCAMP5Q8TAC9 235 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 TTLL2Q9BWV7 592 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 EXOC1Q9NV70 894 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 HMGXB4Q9UGU5 601 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 RAB23Q9ULC3 237 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 MAPK8IP1Q9UQF2 711 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 CPQQ9Y646 472 aa13.12□□□□□ -0.31
PHBP3-201ENST00000412562 DCDC2BA2VCK2 349 aa13.11□□□□□ -0.31
PHBP3-201ENST00000412562 GDF9O60383 454 aa13.11□□□□□ -0.31
PHBP3-201ENST00000412562 CLSTN1O94985 981 aa13.11□□□□□ -0.31
PHBP3-201ENST00000412562 NR3C1P04150 777 aa13.11□□□□□ -0.31
PHBP3-201ENST00000412562 RETP07949 1114 aa13.11□□□□□ -0.31
PHBP3-201ENST00000412562 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
PHBP3-201ENST00000412562 HOXA6P31267 233 aa13.11□□□□□ -0.31
PHBP3-201ENST00000412562 ATICP31939 592 aa13.11□□□□□ -0.31
PHBP3-201ENST00000412562 SLC6A11P48066 632 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms