RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 CRTAC1Q9NQ79 661 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PANK4Q9NVE7 773 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 INTS13Q9NVM9 706 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TRPM5Q9NZQ8 1165 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CDH9Q9ULB4 789 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SRPRBQ9Y5M8 271 aaKnown RBP15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 LEFTY2O00292 366 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 KHNYNO15037 678 aaKnown RBP15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ANXA13P27216 316 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 USP46P62068 366 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CYP27A1Q02318 531 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 DENND5BQ6ZUT9 1274 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 LIMS2Q7Z4I7 341 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 RASSF3Q86WH2 238 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TTC30AQ86WT1 665 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 OR5B17Q8NGF7 314 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 KBTBD7Q8WVZ9 684 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MMP17Q9ULZ9 603 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PTPRDP23468 1912 aa15.23■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PTPRJQ12913 1337 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PATE3B3GLJ2 98 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ABL1P00519 1130 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TNNC2P02585 160 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PROS1P07225 676 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PFKLP17858 780 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 BCKDHBP21953 392 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 DHPSP49366 369 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CEBPZQ03701 1054 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CRY1Q16526 586 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 GAB4Q2WGN9 574 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SH3PXD2AQ5TCZ1 1133 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CYP2U1Q7Z449 544 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MDGA1Q8NFP4 955 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CNOT6LQ96LI5 555 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CEP295NLQ96MC4 621 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MMS19Q96T76 1030 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 RNF38Q9H0F5 515 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TMEM9BQ9NQ34 198 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ZFHX4Q86UP3 3567 aa15.22■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MYOFQ9NZM1 2061 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 LAMA1P25391 3075 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ZNF840PA6NDX5 716 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ZNF233A6NK53 670 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 KIAA0391O15091 583 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CYP17A1P05093 508 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 STAT6P42226 847 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SLC6A11P48066 632 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 IRX4P78413 519 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MRPS21P82921 87 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ZNF252P-AS1Q0IIN9 211 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 FOXC1Q12948 553 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SURF1Q15526 300 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 DUOXA2Q1HG44 320 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 FAM173BQ6P4H8 233 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TMEM92Q6UXU6 159 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CBWD2Q8IUF1 395 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MYCBPAPQ8TBZ2 947 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PIGKQ92643 395 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PCED1BQ96HM7 432 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TTLL2Q9BWV7 592 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SMPD4Q9NXE4 827 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 EHD2Q9NZN4 543 aa15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 RALYQ9UKM9 306 aaKnown RBP15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
HLA-DQB2-229ENST00000411527 C1QTNF9BB2RNN3 333 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 F8VP50 259 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CDX4O14627 284 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SLC9A3R1O14745 358 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SCAMP3O14828 347 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TRIM66O15016 1216 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ALDH1A2O94788 518 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 C1QTNF9P0C862 333 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 HNRNPLP14866 589 aaKnown RBP eCLIP15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 PPP3CCP48454 512 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SLC7A9P82251 487 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 DHCR24Q15392 516 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 UAP1L1Q3KQV9 507 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 MDH1BQ5I0G3 518 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 HS2ST1Q7LGA3 356 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SFTPA1Q8IWL2 248 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 ALLCQ8N6M5 410 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 TXNDC5Q8NBS9 432 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 RLN3Q8WXF3 142 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 C8orf48Q96LL4 319 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 PNKPQ96T60 521 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 SNX25Q9H3E2 840 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CPQQ9Y646 472 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CFAP47Q6ZTR5 3102 aa15.2■□□□□ 0.02
HLA-DQB2-229ENST00000411527 A0A087X0B3 334 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 MAP3K13O43283 966 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 KLF8O95600 359 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 APODP05090 189 aa15.19■□□□□ 0.02
HLA-DQB2-229ENST00000411527 CEACAM1P13688 526 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms