RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 DYNLT1P63172 113 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 CAV1Q03135 178 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 KRT71Q3SY84 523 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 DRICH1Q6PGQ1 229 aaPredicted RBP21.73■■□□□ 1.07
USP39-203ENST00000409470 ADGRF2Q8IZF7 708 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 CRYBG2Q8N1P7 616 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 SMC1BQ8NDV3 1235 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 TRAIPQ9BWF2 469 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 SENP6Q9GZR1 1112 aaPredicted RBP21.73■■□□□ 1.07
USP39-203ENST00000409470 EPB41L4BQ9H329 900 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 SEMA4AQ9H3S1 761 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 FAM105AQ9NUU6 356 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 CCND3P30281 292 aaPredicted RBP21.73■■□□□ 1.07
USP39-203ENST00000409470 PCK1P35558 622 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 PLCB3Q01970 1234 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 KCNA10Q16322 511 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 TMEM110Q86TL2 294 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 SCUBE3Q8IX30 993 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 BBOF1Q8ND07 529 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 EFR3BQ9Y2G0 817 aa21.73■■□□□ 1.07
USP39-203ENST00000409470 NUDT17P0C025 328 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 LRPAP1P30533 357 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 NKX3-2P78367 333 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 SLC6A3Q01959 620 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 CDO1Q16878 200 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 C15orf59Q2T9L4 293 aaPredicted RBP21.72■■□□□ 1.07
USP39-203ENST00000409470 SH3PXD2AQ5TCZ1 1133 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 TRNP1Q6NT89 227 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 OLFML1Q6UWY5 402 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 LEKR1Q6ZMV7 388 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 ANKRD52Q8NB46 1076 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 STK32AQ8WU08 396 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 PPP1R10Q96QC0 940 aaKnown RBP21.72■■□□□ 1.07
USP39-203ENST00000409470 GPBP1L1Q9HC44 474 aaPredicted RBP21.72■■□□□ 1.07
USP39-203ENST00000409470 CHST12Q9NRB3 414 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 CENPFP49454 3210 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 TP73O15350 636 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 PRKAR2AP13861 404 aaKnown RBP21.72■■□□□ 1.07
USP39-203ENST00000409470 ELNP15502 786 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 NR1D1P20393 614 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 THPOP40225 353 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 BCAT1P54687 386 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 BST2Q10589 180 aaKnown RBP21.72■■□□□ 1.07
USP39-203ENST00000409470 SLC29A2Q14542 456 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 TAF5Q15542 800 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 SKIDA1Q1XH10 827 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 RHBDF2Q6PJF5 856 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 PRUNE1Q86TP1 453 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 CCHCR1Q8TD31 782 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 TNIP3Q96KP6 325 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 CAPS2Q9BXY5 557 aa21.72■■□□□ 1.07
USP39-203ENST00000409470 MEIS3P2A8K0S8 358 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 GPR182O15218 404 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 CST8O60676 142 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 RPLP2P05387 115 aaKnown RBP21.71■■□□□ 1.07
USP39-203ENST00000409470 CD48P09326 243 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 KLRC2P26717 231 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 MLH1P40692 756 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 VCPP55072 806 aaKnown RBP21.71■■□□□ 1.07
USP39-203ENST00000409470 HOOK3Q86VS8 718 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 TOP6BLQ8N6T0 577 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 CMASQ8NFW8 434 aaPredicted RBP21.71■■□□□ 1.07
USP39-203ENST00000409470 CFAP57Q96MR6 1250 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 CALN1Q9BXU9 219 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 TSPYL1Q9H0U9 437 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 SLC38A7Q9NVC3 462 aa21.71■■□□□ 1.07
USP39-203ENST00000409470 DRG1Q9Y295 367 aaKnown RBP21.71■■□□□ 1.07
USP39-203ENST00000409470 CYB561D2O14569 222 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 PAPSS1O43252 624 aaPredicted RBP21.7■■□□□ 1.06
USP39-203ENST00000409470 PRPSAP2O60256 369 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 SHBGP04278 402 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 DESP17661 470 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 ATP1A2P50993 1020 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 ATP11AP98196 1134 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 NOGQ13253 232 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 PTGISQ16647 500 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 CCDC14Q49A88 953 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 IZUMO3Q5VZ72 239 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 LIMS2Q7Z4I7 341 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 RFX6Q8HWS3 928 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 ZDHHC17Q8IUH5 632 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 ALLCQ8N6M5 410 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 SLC2A14Q8TDB8 520 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 GAD1Q99259 594 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 B3GNT5Q9BYG0 378 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 RIPK2O43353 540 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 AOC2O75106 756 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 WARSP23381 471 aaKnown RBP21.7■■□□□ 1.06
USP39-203ENST00000409470 SDC4P31431 198 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 ACTN2P35609 894 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 CHKAP35790 457 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 SKOR1P84550 965 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 CAP1Q01518 475 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 SP3Q02447 781 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 MGAT3Q09327 533 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 TAZQ16635 292 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 AGBL2Q5U5Z8 902 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 KDM7AQ6ZMT4 941 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 BBS12Q6ZW61 710 aa21.7■■□□□ 1.06
USP39-203ENST00000409470 TTC13Q8NBP0 860 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms