RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 LIMA1Q9UHB6 759 aaKnown RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 CAPN11Q9UMQ6 739 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 CCDC195A0A1B0GUA6 201 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 CCDC78A2IDD5 438 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 CFLARO15519 480 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 TYK2P29597 1187 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 STK4Q13043 487 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 MTFR1Q15390 333 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 BOLA3Q53S33 107 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 ZNF697Q5TEC3 545 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 DCLRE1AQ6PJP8 1040 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 ELOA2Q8IYF1 753 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 MTMR14Q8NCE2 650 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 CXorf40AQ8TE69 158 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 OSCP1Q8WVF1 389 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 LPPQ93052 612 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 OTUB1Q96FW1 271 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 Q9H521 79 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 RRN3Q9NYV6 651 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 MRPS17Q9Y2R5 130 aaKnown RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 HNRNPCL2B2RXH8 293 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 C5orf58C9J3I9 102 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 HNRNPCL1O60812 293 aaKnown RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 RECQL4O94761 1208 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 SUN1O94901 812 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 ARIH2O95376 493 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 ADH1CP00326 375 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 OCM2P0CE71 109 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 OCMP0CE72 109 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 MSH3P20585 1137 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 CDC25CP30307 473 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 PCK1P35558 622 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 GRK3P35626 688 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 CSE1LP55060 971 aaKnown RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 RTP1P59025 263 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 PDCLQ13371 301 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 SPDYAQ5MJ70 313 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 SYCP2LQ5T4T6 812 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 CCDC137Q6PK04 289 aaKnown RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 WDR48Q8TAF3 677 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 SLC20A1Q8WUM9 679 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 LRRC37BQ96QE4 947 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 EFHD1Q9BUP0 239 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 AASDHPPTQ9NRN7 309 aa5.22□□□□□ -1.57
SCN3A-203ENST00000409101 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 AAR2Q9Y312 384 aaKnown RBP5.22□□□□□ -1.57
SCN3A-203ENST00000409101 FRMD3A2A2Y4 597 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 FAM86B1E9PN63 330 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 FAM86B2P0C5J1 330 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 CSH1P0DML2 217 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 CSH2P0DML3 217 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 MAP2K2P36507 400 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 ATP6V1E1P36543 226 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 NAA25Q14CX7 972 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 GRIK5Q16478 980 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 EPC2Q52LR7 807 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 ACAD10Q6JQN1 1059 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 ZPBP2Q6X784 338 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 LMNTD2Q8IXW0 634 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 UBE2Q2Q8WVN8 375 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 TUBB6Q9BUF5 446 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 ZNF518BQ9C0D4 1074 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 TMEM134Q9H6X4 195 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 CNOT10Q9H9A5 744 aaKnown RBP5.21□□□□□ -1.57
SCN3A-203ENST00000409101 PAK5Q9P286 719 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 XPO7Q9UIA9 1087 aaKnown RBP5.21□□□□□ -1.57
SCN3A-203ENST00000409101 TRIM33Q9UPN9 1127 aa5.21□□□□□ -1.57
SCN3A-203ENST00000409101 CICQ96RK0 1608 aaPredicted RBP5.21□□□□□ -1.57
SCN3A-203ENST00000409101 FAM187AA6NFU0 413 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 RBAK-RBAKDNI3L0D1 243 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 TEX33O43247 280 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 NCK2O43639 380 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SRP72O76094 671 aaKnown RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 USP17L7P0C7H9 530 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 FDFT1P37268 417 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SLC7A5Q01650 507 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 TP53BP2Q13625 1128 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SMTNL2Q2TAL5 461 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 FSCBQ5H9T9 825 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 PHLDB3Q6NSJ2 640 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 OTOP1Q7RTM1 612 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 VSIG10LQ86VR7 867 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 CACUL1Q86Y37 369 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 MTBPQ96DY7 904 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 CAPS2Q9BXY5 557 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ECT2Q9H8V3 914 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 ATP13A1Q9HD20 1204 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 LNPEPQ9UIQ6 1025 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 DNMT3LQ9UJW3 386 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SLC45A1Q9Y2W3 748 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 DYRK1BQ9Y463 629 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SMIM35A0A1B0GVV1 85 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 UNCXA6NJT0 531 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 SPATA31C2B4DYI2 1134 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 C1QTNF3-AMACRE9PGA6 284 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 MAFO75444 373 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-203ENST00000409101 LGR5O75473 907 aa5.21□□□□□ -1.58
SCN3A-203ENST00000409101 CRTAMO95727 393 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms