RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 CACNA2D3Q8IZS8 1091 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 LRRC52Q8N7C0 313 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 RXFP2Q8WXD0 754 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 RSAD2Q8WXG1 361 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 PPM1EQ8WY54 764 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 PRMT1Q99873 361 aaKnown RBP18.75■□□□□ 0.59
CHTOP-205ENST00000403433 CCDC134Q9H6E4 229 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 RSAD1Q9HA92 442 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 PDCD11Q14690 1871 aaKnown RBP18.75■□□□□ 0.59
CHTOP-205ENST00000403433 CELF2O95319 508 aaKnown RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 SETSIPP0DME0 302 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 DARSP14868 501 aaKnown RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 MFSD10Q14728 455 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 TAF5Q15542 800 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 ACOT1Q86TX2 421 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 TLK2Q86UE8 772 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 RIBC1Q8N443 379 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 SEC16BQ96JE7 1060 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 MAK16Q9BXY0 300 aaKnown RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 CXCL16Q9H2A7 254 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 TMEM120BA0PK00 339 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 MBLAC1A4D2B0 266 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 APOC4-APOC2K7ER74 178 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 PPEF2O14830 753 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 MCF2LO15068 1137 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 PRPSAP2O60256 369 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 APOC2P02655 101 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 DESP17661 470 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 RGS7P49802 495 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 IRX5P78411 483 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 PRAMEF19Q5SWL8 479 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 PPP1R26Q5T8A7 1209 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 TADA2BQ86TJ2 420 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 DYDC1Q8WWB3 177 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 PRCCQ92733 491 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 C18orf25Q96B23 403 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 ZNF317Q96PQ6 595 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 PEBP4Q96S96 227 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 NXF3Q9H4D5 531 aaKnown RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 CDHR5Q9HBB8 845 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 FAM49BQ9NUQ9 324 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 CNTN3Q9P232 1028 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 HESX1Q9UBX0 185 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 CPA4Q9UI42 421 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 GNEQ9Y223 722 aaKnown RBP18.74■□□□□ 0.59
CHTOP-205ENST00000403433 HES2Q9Y543 173 aa18.74■□□□□ 0.59
CHTOP-205ENST00000403433 RECQL4O94761 1208 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 ECM2O94769 699 aaPredicted RBP18.73■□□□□ 0.59
CHTOP-205ENST00000403433 AXLP30530 894 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 CDH6P55285 790 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 SNX16P57768 344 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 EIF3EP60228 445 aaKnown RBP18.73■□□□□ 0.59
CHTOP-205ENST00000403433 IFT88Q13099 833 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 MAP2K5Q13163 448 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 IRF5Q13568 498 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 ZBTB6Q15916 424 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 GLRA4Q5JXX5 417 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 RNF187Q5TA31 235 aaPredicted RBP18.73■□□□□ 0.59
CHTOP-205ENST00000403433 TRNP1Q6NT89 227 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 PPIL6Q8IXY8 311 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 PPP1R13LQ8WUF5 828 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 KAT2BQ92831 832 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 APOL6Q9BWW8 343 aa18.73■□□□□ 0.59
CHTOP-205ENST00000403433 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.73■□□□□ 0.59
CHTOP-205ENST00000403433 EXOC1LA0A1B0GW35 172 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 GRAP2O75791 330 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 IFNAR2P48551 515 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 CTCFP49711 727 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-205ENST00000403433 GDF10P55107 478 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 CDO1Q16878 200 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 C15orf59Q2T9L4 293 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-205ENST00000403433 MORN1Q5T089 497 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 C9orf57Q5W0N0 161 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 SESTD1Q86VW0 696 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 OR6B3Q8NGW1 331 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 PIWIL1Q96J94 861 aaKnown RBP18.72■□□□□ 0.59
CHTOP-205ENST00000403433 CABS1Q96KC9 395 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 NSRP1Q9H0G5 558 aaKnown RBP18.72■□□□□ 0.59
CHTOP-205ENST00000403433 KCNK9Q9NPC2 374 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 TBK1Q9UHD2 729 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 UBQLN1Q9UMX0 589 aaKnown RBP18.72■□□□□ 0.59
CHTOP-205ENST00000403433 NAALADL1Q9UQQ1 740 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 FARP1Q9Y4F1 1045 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-205ENST00000403433 DPYSL4O14531 572 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 TFDP2Q14188 446 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 KRT81Q14533 505 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 HIF1AQ16665 826 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 PKDCCQ504Y2 493 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 FAM47CQ5HY64 1035 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 SH3PXD2AQ5TCZ1 1133 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 PMF1Q6P1K2 205 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 C6orf89Q6UWU4 347 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 OLFML1Q6UWY5 402 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 VSTM1Q6UX27 236 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 UNC93AQ86WB7 457 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 TTC30AQ86WT1 665 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 CCDC13Q8IYE1 715 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 ZBED8Q8IZ13 594 aa18.72■□□□□ 0.59
CHTOP-205ENST00000403433 MGARPQ8TDB4 240 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms