RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 SHKBP1Q8TBC3 707 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 KCNG4Q8TDN1 519 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 POMGNT1Q8WZA1 660 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 NKD2Q969F2 451 aaPredicted RBP7.1□□□□□ -1.27
VIM2P-201ENST00000402383 TCEAL4Q96EI5 215 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 TRMT2BQ96GJ1 504 aaKnown RBP7.1□□□□□ -1.27
VIM2P-201ENST00000402383 FUBP3Q96I24 572 aaKnown RBP eCLIP7.1□□□□□ -1.27
VIM2P-201ENST00000402383 ZNF560Q96MR9 790 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 ZNF396Q96N95 335 aaPredicted RBP7.1□□□□□ -1.27
VIM2P-201ENST00000402383 CLIC6Q96NY7 704 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 CORO1BQ9BR76 489 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 TRMT61BQ9BVS5 477 aaKnown RBP7.1□□□□□ -1.27
VIM2P-201ENST00000402383 PLA2G2FQ9BZM2 168 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 ZNF334Q9HCZ1 680 aaPredicted RBP7.1□□□□□ -1.27
VIM2P-201ENST00000402383 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 TBC1D7Q9P0N9 293 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 RCOR1Q9UKL0 485 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 PCDHGA2Q9Y5H1 932 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 DNMT3AQ9Y6K1 912 aaPredicted RBP7.1□□□□□ -1.27
VIM2P-201ENST00000402383 CHD6Q8TD26 2715 aa7.1□□□□□ -1.27
VIM2P-201ENST00000402383 MYO18AQ92614 2054 aaKnown RBP7.1□□□□□ -1.27
VIM2P-201ENST00000402383 MYH10P35580 1976 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 COL4A3Q01955 1670 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 PLXND1Q9Y4D7 1925 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 GOLGA6L3A6NEY3 463 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 TISP43B9A030 160 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 MYL1P05976 194 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 SP9P0CG40 484 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 HAPLN1P10915 354 aaPredicted RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 HARSP12081 509 aaKnown RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 HMGA1P17096 107 aaKnown RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 PFKLP17858 780 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 ATF6P18850 670 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 STAT6P42226 847 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 MATR3P43243 847 aaKnown RBP eCLIP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 ALDH1A3P47895 512 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 LHX1P48742 406 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 ENPEPQ07075 957 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 DHX8Q14562 1220 aaKnown RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 KLHL40Q2TBA0 621 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 SPECC1Q5M775 1068 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 COX20Q5RI15 118 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 ARMCX5Q6P1M9 558 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 FAM173BQ6P4H8 233 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 FAM171BQ6P995 826 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 SHC4Q6S5L8 630 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 VITQ6UXI7 678 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 ZNF852Q6ZMS4 543 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 DYMQ7RTS9 669 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 ASCL5Q7RTU5 278 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 DNAJB7Q7Z6W7 309 aaPredicted RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 METTL23Q86XA0 190 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 CCDC65Q8IXS2 484 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 DCP1BQ8IZD4 617 aaKnown RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 THEM5Q8N1Q8 247 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 GPD1LQ8N335 351 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 SYNPOQ8N3V7 929 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 RASSF8Q8NHQ8 419 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 MCRS1Q96EZ8 462 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 ZSWIM3Q96MP5 696 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 DUSP9Q99956 384 aaKnown RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 BCO2Q9BYV7 579 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 CHRDQ9H2X0 955 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 C8orf33Q9H7E9 229 aaPredicted RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 PANK4Q9NVE7 773 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 INTS13Q9NVM9 706 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 GMPR2Q9P2T1 348 aaKnown RBP7.09□□□□□ -1.27
VIM2P-201ENST00000402383 SIX4Q9UIU6 781 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 CA14Q9ULX7 337 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 POLIQ9UNA4 740 aa7.09□□□□□ -1.27
VIM2P-201ENST00000402383 MYBPHLA2RUH7 354 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 SOWAHDA6NJG2 315 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 ZNF233A6NK53 670 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 CYB561D2O14569 222 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 TGFB1I1O43294 461 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 PRPF40AO75400 957 aaKnown RBP7.08□□□□□ -1.28
VIM2P-201ENST00000402383 TACC1O75410 805 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 NOL4O94818 638 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 GCNT3O95395 438 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 LMNAP02545 664 aaKnown RBP7.08□□□□□ -1.28
VIM2P-201ENST00000402383 F11P03951 625 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 ZSCAN22P10073 491 aaPredicted RBP7.08□□□□□ -1.28
VIM2P-201ENST00000402383 MYBP10242 640 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 CDC25CP30307 473 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 GUCY2FP51841 1108 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 RBP5P82980 135 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 SPAG1Q07617 926 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 SNW1Q13573 536 aaKnown RBP7.08□□□□□ -1.28
VIM2P-201ENST00000402383 STK38Q15208 465 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 ARHGAP29Q52LW3 1261 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 RESP18Q5W5W9 173 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 WSCD1Q658N2 575 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 UNC13DQ70J99 1090 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 FRMD5Q7Z6J6 570 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 TMEM150AQ86TG1 271 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 LRRTM3Q86VH5 581 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 RALGPS2Q86X27 583 aaPredicted RBP7.08□□□□□ -1.28
VIM2P-201ENST00000402383 WDR49Q8IV35 697 aa7.08□□□□□ -1.28
VIM2P-201ENST00000402383 PDCL2Q8N4E4 241 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms