RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 DNAJC17Q9NVM6 304 aaKnown RBP16.5■□□□□ 0.23
CDC42-203ENST00000400259 UBQLN1Q9UMX0 589 aaKnown RBP16.5■□□□□ 0.23
CDC42-203ENST00000400259 NME7Q9Y5B8 376 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 RECQL4O94761 1208 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 IGHA2P01877 340 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 ZSCAN5DPP0CG00 497 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 MAGEA4P43358 317 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 CPT1AP50416 773 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 STAT4Q14765 748 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 XKR4Q5GH76 650 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 PPP1R26Q5T8A7 1209 aaPredicted RBP16.5■□□□□ 0.23
CDC42-203ENST00000400259 ARHGAP17Q68EM7 881 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 C12orf29Q8N999 325 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 MDM1Q8TC05 714 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 STK32AQ8WU08 396 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 HAUS1Q96CS2 278 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 TMEM121Q9BTD3 319 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 NXF3Q9H4D5 531 aaKnown RBP16.5■□□□□ 0.23
CDC42-203ENST00000400259 RSAD1Q9HA92 442 aa16.5■□□□□ 0.23
CDC42-203ENST00000400259 APOC4-APOC2K7ER74 178 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 APOC2P02655 101 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 CD48P09326 243 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 ETS1P14921 441 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 SNX17Q15036 470 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 CST9Q5W186 159 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 OR6B2Q6IFH4 312 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 OLFML1Q6UWY5 402 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 DPH6Q7L8W6 267 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 PCGF5Q86SE9 256 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 TMEM110Q86TL2 294 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 EXOC3L1Q86VI1 746 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 TTC30AQ86WT1 665 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 KCTD6Q8NC69 237 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 SLC35F5Q8WV83 523 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 RXFP2Q8WXD0 754 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 C18orf25Q96B23 403 aaPredicted RBP16.49■□□□□ 0.23
CDC42-203ENST00000400259 TTC25Q96NG3 672 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 PEBP4Q96S96 227 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 SELENOSQ9BQE4 189 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 PCSK1NQ9UHG2 260 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 FAM169AQ9Y6X4 670 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 SGK1O00141 431 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 IGF2BP3O00425 579 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDC42-203ENST00000400259 PIRO00625 290 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 CD4P01730 458 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 HOXC8P31273 242 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 ACOT1Q86TX2 421 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 DNAJB3Q8WWF6 145 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 TRIM6Q9C030 488 aaPredicted RBP16.49■□□□□ 0.23
CDC42-203ENST00000400259 EURLQ9NYK6 297 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 FARP1Q9Y4F1 1045 aaPredicted RBP16.49■□□□□ 0.23
CDC42-203ENST00000400259 HES2Q9Y543 173 aa16.49■□□□□ 0.23
CDC42-203ENST00000400259 KCNE1P15382 129 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 PDGFRAP16234 1089 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 PECAM1P16284 738 aaPredicted RBP16.48■□□□□ 0.23
CDC42-203ENST00000400259 SNX16P57768 344 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 PLCB3Q01970 1234 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 SOWAHAQ2M3V2 549 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 PMF1Q6P1K2 205 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 MICALCLQ6ZW33 695 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 ZDHHC17Q8IUH5 632 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 TMEM40Q8WWA1 233 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 PRCCQ92733 491 aaPredicted RBP16.48■□□□□ 0.23
CDC42-203ENST00000400259 PIWIL1Q96J94 861 aaKnown RBP16.48■□□□□ 0.23
CDC42-203ENST00000400259 CCDC77Q9BR77 488 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 RASSF4Q9H2L5 321 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 GDAP2Q9NXN4 497 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 GJD2Q9UKL4 321 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 CDH16O75309 829 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 CAPN15O75808 1086 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 TAF5Q15542 800 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 UBXN11Q5T124 520 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 LIMS2Q7Z4I7 341 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 YTHDF3Q7Z739 585 aaKnown RBP16.48■□□□□ 0.23
CDC42-203ENST00000400259 SESTD1Q86VW0 696 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 VSIG1Q86XK7 387 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 RIBC1Q8N443 379 aaPredicted RBP16.48■□□□□ 0.23
CDC42-203ENST00000400259 ARHGEF2Q92974 986 aaKnown RBP16.48■□□□□ 0.23
CDC42-203ENST00000400259 LENG1Q96BZ8 264 aaPredicted RBP16.48■□□□□ 0.23
CDC42-203ENST00000400259 C9orf72Q96LT7 481 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 CFAP57Q96MR6 1250 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 ZNF317Q96PQ6 595 aaPredicted RBP16.48■□□□□ 0.23
CDC42-203ENST00000400259 NCAPGQ9BPX3 1015 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 KATNAL1Q9BW62 490 aa16.48■□□□□ 0.23
CDC42-203ENST00000400259 MANSC4A6NHS7 340 aaPredicted RBP16.47■□□□□ 0.23
CDC42-203ENST00000400259 TREHO43280 583 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 XPOTO43592 962 aaKnown RBP16.47■□□□□ 0.23
CDC42-203ENST00000400259 RPL34P49207 117 aaKnown RBP16.47■□□□□ 0.23
CDC42-203ENST00000400259 CRYBB1P53674 252 aaPredicted RBP16.47■□□□□ 0.23
CDC42-203ENST00000400259 DYNLT1P63172 113 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 SLC6A3Q01959 620 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 CCDC14Q49A88 953 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 FBXO47Q5MNV8 452 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 RASAL3Q86YV0 1011 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 RFX6Q8HWS3 928 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 CRYBG2Q8N1P7 616 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 NME8Q8N427 588 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 HSPH1Q92598 858 aa16.47■□□□□ 0.23
CDC42-203ENST00000400259 KHSRPQ92945 711 aaKnown RBP eCLIP16.47■□□□□ 0.232e-7■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms