RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 NFATC1O95644 943 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 OLFM2O95897 454 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 PDGFRBP09619 1106 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 TMEM191BP0C7N4 346 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 PDCP20941 246 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 GNL1P36915 607 aaPredicted RBP12.75□□□□□ -0.37
SYNE4-203ENST00000397428 GRIK1P39086 918 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 TXLNAP40222 546 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 DGKEP52429 567 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 CREB5Q02930 508 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 RESTQ13127 1097 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 PSMD2Q13200 908 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 KCNB1Q14721 858 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 SLC39A14Q15043 492 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 PMS2CLQ68D20 193 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 FAM173BQ6P4H8 233 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 DENND5BQ6ZUT9 1274 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 C11orf74Q86VG3 221 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 OLIG1Q8TAK6 271 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 ZNF507Q8TCN5 953 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 ANKRD36BP1Q96IX9 119 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 C8orf48Q96LL4 319 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 KIAA1586Q9HCI6 787 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 CHD8Q9HCK8 2581 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 TRPM5Q9NZQ8 1165 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 MMP17Q9ULZ9 603 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 INVSQ9Y283 1065 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 NME7Q9Y5B8 376 aa12.75□□□□□ -0.37
SYNE4-203ENST00000397428 SDK1Q7Z5N4 2213 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 C4orf47A7E2U8 309 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 CDX4O14627 284 aaPredicted RBP12.74□□□□□ -0.37
SYNE4-203ENST00000397428 TACC1O75410 805 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 TNNC2P02585 160 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 SYT1P21579 422 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 STAT6P42226 847 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 SLC6A11P48066 632 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 PSMC1P62191 440 aaKnown RBP12.74□□□□□ -0.37
SYNE4-203ENST00000397428 MRPS21P82921 87 aaKnown RBP12.74□□□□□ -0.37
SYNE4-203ENST00000397428 CRY1Q16526 586 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 C2orf27AQ580R0 203 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 EPM2AIP1Q7L775 607 aaPredicted RBP12.74□□□□□ -0.37
SYNE4-203ENST00000397428 TRAPPC11Q7Z392 1133 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 CBWD2Q8IUF1 395 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 WDR49Q8IV35 697 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 CCDC65Q8IXS2 484 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 GLIS3Q8NEA6 775 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 TTC16Q8NEE8 873 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 MYLPFQ96A32 169 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
SYNE4-203ENST00000397428 KBTBD4Q9NVX7 518 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 WASF3Q9UPY6 502 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 R3HCC1Q9Y3T6 440 aaKnown RBP12.74□□□□□ -0.37
SYNE4-203ENST00000397428 FRYQ5TBA9 3013 aa12.74□□□□□ -0.37
SYNE4-203ENST00000397428 USP24Q9UPU5 2620 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 LNP1A1A4G5 178 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 SLC9A3R1O14745 358 aaPredicted RBP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 TRIM66O15016 1216 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 KHNYNO15037 678 aaKnown RBP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 TGFB1I1O43294 461 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 HNRNPLP14866 589 aaKnown RBP eCLIP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 PTPN1P18031 435 aaKnown RBP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 CYP27A1Q02318 531 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 CEBPZQ03701 1054 aaKnown RBP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 DHCR24Q15392 516 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 LMBRD2Q68DH5 695 aaPredicted RBP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 PSAPL1Q6NUJ1 521 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 CNNM4Q6P4Q7 775 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 RHBDF2Q6PJF5 856 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 STXBP4Q6ZWJ1 553 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 FILIP1Q7Z7B0 1213 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 CCDC33Q8N5R6 958 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 NOC3LQ8WTT2 800 aaKnown RBP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 ZNF516Q92618 1163 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 HPS3Q969F9 1004 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 USP28Q96RU2 1077 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 PNKPQ96T60 521 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 MRPL45Q9BRJ2 306 aaKnown RBP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 EDEM2Q9BV94 578 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
SYNE4-203ENST00000397428 HSPBP1Q9NZL4 362 aa12.73□□□□□ -0.37
SYNE4-203ENST00000397428 MAP1BP46821 2468 aaKnown RBP12.72□□□□□ -0.37
SYNE4-203ENST00000397428 HELZP42694 1942 aaKnown RBP12.72□□□□□ -0.37
SYNE4-203ENST00000397428 CFAP47Q6ZTR5 3102 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 F8VP50 259 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 GIPC1O14908 333 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 OAS1P00973 400 aaKnown RBP12.72□□□□□ -0.37
SYNE4-203ENST00000397428 CYP17A1P05093 508 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 PROS1P07225 676 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 CSRP1P21291 193 aaKnown RBP12.72□□□□□ -0.37
SYNE4-203ENST00000397428 BCKDHBP21953 392 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 ANXA13P27216 316 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 GBP1P32455 592 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 EIF2DP41214 584 aaKnown RBP12.72□□□□□ -0.37
SYNE4-203ENST00000397428 TNFRSF4P43489 277 aa12.72□□□□□ -0.37
SYNE4-203ENST00000397428 CACNA2D1P54289 1103 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms