RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 FAM131BQ86XD5 332 aa15.33■□□□□ 0.04
PPP1CB-203ENST00000395366 RAPGEF5Q92565 580 aa15.33■□□□□ 0.04
PPP1CB-203ENST00000395366 HDAC11Q96DB2 347 aa15.33■□□□□ 0.04
PPP1CB-203ENST00000395366 NIFKQ9BYG3 293 aaKnown RBP15.33■□□□□ 0.04
PPP1CB-203ENST00000395366 SEMA4AQ9H3S1 761 aa15.33■□□□□ 0.04
PPP1CB-203ENST00000395366 TMBIM4Q9HC24 238 aa15.33■□□□□ 0.04
PPP1CB-203ENST00000395366 MTHFD1LQ6UB35 978 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 RAB44Q7Z6P3 723 aaPredicted RBP15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 TADA2BQ86TJ2 420 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 MDM1Q8TC05 714 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 IFT43Q96FT9 208 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 SERPINB12Q96P63 405 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 SH3GL3Q99963 347 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 ALG13Q9NP73 1137 aaKnown RBP15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 XPNPEP1Q9NQW7 623 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 FAM47DPA6NHR8 397 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 F8VP50 259 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 DHX15O43143 795 aaKnown RBP15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 RPL21P46778 160 aaKnown RBP15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 MAPRE1Q15691 268 aaKnown RBP15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 KDM7AQ6ZMT4 941 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 RASSF3Q86WH2 238 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 USP33Q8TEY7 942 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 HES6Q96HZ4 224 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 KIF9Q9HAQ2 790 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 RNF19AQ9NV58 838 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 HMGCRP04035 888 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 ESRRAP11474 423 aaPredicted RBP15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 SLC8A1P32418 973 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 MARCKSL1P49006 195 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 MAMLD1Q13495 774 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 NUDCD3Q8IVD9 361 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 GCNAQ96QF7 691 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 TUBB6Q9BUF5 446 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 FIS1Q9Y3D6 152 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 BNIP3LO60238 219 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 SPAG6O75602 509 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 UPP2O95045 317 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 HSPA4LO95757 839 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 ASS1P00966 412 aaKnown RBP15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 SGSM3Q96HU1 749 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 TJP2Q9UDY2 1190 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 HES2Q9Y543 173 aa15.32■□□□□ 0.04
PPP1CB-203ENST00000395366 TJP1Q07157 1748 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 RPLP2P05387 115 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 EPHB2P29323 1055 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 FKBP1BP68106 108 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 PFDN4Q9NQP4 134 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 CCDC195A0A1B0GUA6 201 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 CASTOR2A6NHX0 329 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 MAP2K7O14733 419 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 CAND2O75155 1236 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 DENND1BQ6P3S1 775 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 LMNTD2Q8IXW0 634 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 RIBC1Q8N443 379 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 MICAL1Q8TDZ2 1067 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■■■■■ 54.9
PPP1CB-203ENST00000395366 ABI2Q9NYB9 513 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 PPARGC1AQ9UBK2 798 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 SALL4Q9UJQ4 1053 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 TIMM13Q9Y5L4 95 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 A0A0G2JLL6 359 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 KPNA7A9QM74 516 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 ACAT1P24752 427 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 ARL2P36404 184 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 VCPP55072 806 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 MAP3K7CLP57077 242 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 MAP2K5Q13163 448 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 MDH1BQ5I0G3 518 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 KLC3Q6P597 504 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 TMC3Q7Z5M5 1100 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 PRRT2Q7Z6L0 340 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 ATXN7L3BQ96GX2 97 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 LRRC37BQ96QE4 947 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 PCDHB18PQ96TA0 734 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 CHST7Q9NS84 486 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 KRT82Q9NSB4 513 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 BCAP29Q9UHQ4 241 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 AP4E1Q9UPM8 1137 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 ADAMTS7Q9UKP4 1686 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 HMBSP08397 361 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 LHX1P48742 406 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 C4orf22Q6V702 233 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 KDELC2Q7Z4H8 507 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 SCUBE3Q8IX30 993 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 MIPOL1Q8TD10 442 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 PDCD6IPQ8WUM4 868 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 SKA2Q8WVK7 121 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 TFB1MQ8WVM0 346 aaKnown RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 GRAMD1AQ96CP6 724 aa15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 KLF6Q99612 283 aaPredicted RBP15.31■□□□□ 0.04
PPP1CB-203ENST00000395366 TOGARAM1Q9Y4F4 1720 aa15.3■□□□□ 0.04
PPP1CB-203ENST00000395366 BTAF1O14981 1849 aa15.3■□□□□ 0.04
PPP1CB-203ENST00000395366 SMIM10L2AP0DMW4 78 aa15.3■□□□□ 0.04
PPP1CB-203ENST00000395366 SMIM10L2BP0DMW5 78 aa15.3■□□□□ 0.04
PPP1CB-203ENST00000395366 JAM2P57087 298 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms