RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 MUTP22033 750 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 GRK2P25098 689 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 HSD17B4P51659 736 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 E2F1Q01094 437 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 TAGLNQ01995 201 aaKnown RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 GAD2Q05329 585 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 MOGSQ13724 837 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 RAPGEF1Q13905 1077 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 TMTC3Q6ZXV5 915 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 ZNF605Q86T29 641 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 SLC39A11Q8N1S5 342 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 R3HDM2Q9Y2K5 976 aaKnown RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 BZW2Q9Y6E2 419 aaKnown RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 SOBPA7XYQ1 873 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 NT5C1B-RDH14C9J2C7 533 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 K7ENM7 598 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 ALOX15P16050 662 aaPredicted RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 RBP5P82980 135 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 KLC1Q07866 573 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 SV2BQ7L1I2 683 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 NT5DC4Q86YG4 428 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 JAMLQ86YT9 394 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 ENAHQ8N8S7 591 aaPredicted RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 B3GALNT2Q8NCR0 500 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 CFAP36Q96G28 342 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 TMEM209Q96SK2 561 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 KIFC3Q9BVG8 833 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 WNT8AQ9H1J5 351 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 TUFT1Q9NNX1 390 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 ASTN1O14525 1302 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 CACNA1SQ13698 1873 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 SYCE1LA8MT33 242 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 CLASP2O75122 1294 aaKnown RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 BAG2O95816 211 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 ITGAVP06756 1048 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 ALDH3A1P30838 453 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 ABCG1P45844 678 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 CSE1LP55060 971 aaKnown RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 SIM1P81133 766 aaPredicted RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 POU5F1BQ06416 359 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 C4orf46Q504U0 113 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 MAP7D3Q8IWC1 876 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 PALM2Q8IXS6 379 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 CD101Q93033 1021 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 GTF3C4Q9UKN8 822 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 MORC2Q9Y6X9 1032 aaPredicted RBP8.51□□□□□ -1.05
LIMS1-203ENST00000393310 PIEZO1Q92508 2521 aa8.51□□□□□ -1.05
LIMS1-203ENST00000393310 PRPF3O43395 683 aaKnown RBP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PEX10O60683 326 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 TIPRLO75663 272 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 ZNF24P17028 368 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 CTGFP29279 349 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 YWHABP31946 246 aaKnown RBP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PHBP35232 272 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 MAPK8P45983 427 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PMS2P54278 862 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PPP1R7Q15435 360 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 DUOXA1Q1HG43 343 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 C10orf76Q5T2E6 689 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PIK3AP1Q6ZUJ8 805 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 VPS36Q86VN1 386 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 APLFQ8IW19 511 aaPredicted RBP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 ACCSQ96QU6 501 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 AGO4Q9HCK5 861 aaKnown RBP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 FTSJ1Q9UET6 329 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 DACH1Q9UI36 760 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 VPS37CA5D8V6 355 aaPredicted RBP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 GABRR2P28476 465 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 HOXA9P31269 272 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 CASP2P42575 452 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 TFAMQ00059 246 aaKnown RBP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 GUCY1B3Q02153 619 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 ADGRE1Q14246 886 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 HSDL1Q3SXM5 330 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 RILPL1Q5EBL4 403 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 DNAJC14Q6Y2X3 702 aaPredicted RBP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 RASEFQ8IZ41 740 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 TBCKQ8TEA7 893 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 ANKS1AQ92625 1134 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 GPKOWQ92917 476 aaPredicted RBP eCLIP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 TASP1Q9H6P5 420 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 VRTNQ9H8Y1 702 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 FBRSQ9HAH7 460 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 KCNK12Q9HB15 430 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 FNIP2Q9P278 1114 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 VTI1BQ9UEU0 232 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 FRMPD4Q14CM0 1322 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PCP4L1A6NKN8 68 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 F8VZ95 297 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PIK3CDO00329 1044 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 SH2B2O14492 632 aaPredicted RBP8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PRMT3O60678 531 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 ASGR2P07307 311 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 SCNN1GP51170 649 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 PDE1BQ01064 536 aa8.5□□□□□ -1.05
LIMS1-203ENST00000393310 ACAP1Q15027 740 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms