RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 DOK7Q18PE1 504 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 HSP90AA5PQ58FG0 334 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 TXNRD3NBQ6F5E7 133 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 B3GNT6Q6ZMB0 384 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 TRIM42Q8IWZ5 723 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 FAM172AQ8WUF8 416 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 DGCR14Q96DF8 476 aaKnown RBP12.69□□□□□ -0.38
HERC6-203ENST00000380265 EHMT1Q9H9B1 1298 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 KCND2Q9NZV8 630 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 COL22A1Q8NFW1 1626 aaPredicted RBP12.69□□□□□ -0.38
HERC6-203ENST00000380265 DKC1O60832 514 aaKnown RBP eCLIP12.69□□□□□ -0.38
HERC6-203ENST00000380265 SUPT3HO75486 399 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 ZMPSTE24O75844 475 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 KRT37O76014 449 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 PMLP29590 882 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 PEX6Q13608 980 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 AOC3Q16853 763 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 C1orf228Q6PIY5 440 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 SEPT12Q8IYM1 358 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 CPT1BQ92523 772 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 SSU72Q9NP77 194 aaKnown RBP12.69□□□□□ -0.38
HERC6-203ENST00000380265 PARVAQ9NVD7 372 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 MYPNQ86TC9 1320 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 PENKP01210 267 aaPredicted RBP12.69□□□□□ -0.38
HERC6-203ENST00000380265 GPC3P51654 580 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 PLA2G4FQ68DD2 849 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 KLC3Q6P597 504 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 CDHR3Q6ZTQ4 885 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 ANO5Q75V66 913 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 RFX6Q8HWS3 928 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 STRIP2Q9ULQ0 834 aa12.69□□□□□ -0.38
HERC6-203ENST00000380265 APOBEC2Q9Y235 224 aaKnown RBP12.69□□□□□ -0.38
HERC6-203ENST00000380265 MYOCOSA0A1B0GUC4 107 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 MAP3K10Q02779 954 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 STX3Q13277 289 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 TFDP3Q5H9I0 405 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 MAP3K21Q5TCX8 1036 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 WDR75Q8IWA0 830 aaKnown RBP12.68□□□□□ -0.38
HERC6-203ENST00000380265 ZNF276Q8N554 614 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.68□□□□□ -0.38
HERC6-203ENST00000380265 CATSPER2Q96P56 530 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 PRPF18Q99633 342 aaKnown RBP12.68□□□□□ -0.38
HERC6-203ENST00000380265 PCSK1NQ9UHG2 260 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 ADAMTS6Q9UKP5 1117 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 MAD1L1Q9Y6D9 718 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 ROBO1Q9Y6N7 1651 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 PLIN4Q96Q06 1357 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 TCRBV9S1A1TA0A576 114 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 NDC80O14777 642 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 AVILO75366 819 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 RPL22P35268 128 aaKnown RBP12.68□□□□□ -0.38
HERC6-203ENST00000380265 SOX10P56693 466 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 LGSNQ5TDP6 509 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 CDC42EP5Q6NZY7 148 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 DEFB107AQ8IZN7 70 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 GALNT4Q8N4A0 578 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 CALN1Q9BXU9 219 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 Q9H521 79 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 SUDS3Q9H7L9 328 aaPredicted RBP12.68□□□□□ -0.38
HERC6-203ENST00000380265 KMT5AQ9NQR1 393 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 PRR12Q9ULL5 1215 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 GAKO14976 1311 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
HERC6-203ENST00000380265 COPAP53621 1224 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 SP4Q02446 784 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 DMP1Q13316 513 aaPredicted RBP12.68□□□□□ -0.38
HERC6-203ENST00000380265 ACAP1Q15027 740 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 CYTH1Q15438 398 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 ABCB5Q2M3G0 1257 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 ANKRD20A4Q4UJ75 823 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 TMEM259Q4ZIN3 620 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 RBM12BQ8IXT5 1001 aaKnown RBP12.68□□□□□ -0.38
HERC6-203ENST00000380265 NDUFAF2Q8N183 169 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 NCSTNQ92542 709 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 MKL1Q969V6 931 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
HERC6-203ENST00000380265 GPAMQ9HCL2 828 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 NDUFA13Q9P0J0 144 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 INPP5FQ9Y2H2 1132 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 ZHX2Q9Y6X8 837 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 NAV1Q8NEY1 1877 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
HERC6-203ENST00000380265 ITGB4P16144 1822 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 SPDYE16A6NNV3 312 aaPredicted RBP12.67□□□□□ -0.38
HERC6-203ENST00000380265 TMEM63AO94886 807 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 HPCAP84074 193 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 FAXCQ5TGI0 409 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 MROH9Q5TGP6 573 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 TMCO4Q5TGY1 634 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 MON1BQ7L1V2 547 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 CHSY1Q86X52 802 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 MRPL1Q9BYD6 325 aaKnown RBP12.67□□□□□ -0.38
HERC6-203ENST00000380265 STK32BQ9NY57 414 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 LZTS1Q9Y250 596 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 MAGEB3O15480 346 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 ECE1P42892 770 aa12.67□□□□□ -0.38
HERC6-203ENST00000380265 RPL5P46777 297 aaKnown RBP12.67□□□□□ -0.38
HERC6-203ENST00000380265 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms