RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 CSNK1G1Q9HCP0 422 aa25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 DMAP1Q9NPF5 467 aaPredicted RBP25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 CCDC66A2RUB6 948 aa25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 TULP2O00295 520 aa25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 RIOK3O14730 519 aaKnown RBP25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 HTRA4P83105 476 aaPredicted RBP25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 SLC6A3Q01959 620 aa25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 NIPA2Q8N8Q9 360 aa25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 BTBD6Q96KE9 485 aa25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 METTL5Q9NRN9 209 aaKnown RBP25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 TJP2Q9UDY2 1190 aa25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 INSL6Q9Y581 213 aa25.85■■□□□ 1.73
ECHDC3-201ENST00000379215 MYH10P35580 1976 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 SART1O43290 800 aaKnown RBP25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 FBXO21O94952 628 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 SLU7O95391 586 aaKnown RBP25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 EFEMP2O95967 443 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 PBX3P40426 434 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 RPL7AP62424 266 aaKnown RBP25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 ACAP1Q15027 740 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 CFAP221Q4G0U5 840 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 OLFML1Q6UWY5 402 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 ARCQ7LC44 396 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 TMEM173Q86WV6 379 aaPredicted RBP25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 RNF168Q8IYW5 571 aaPredicted RBP25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 SLC39A11Q8N1S5 342 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 MNS1Q8NEH6 495 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 SPG21Q9NZD8 308 aa25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 MRPL42Q9Y6G3 142 aaKnown RBP25.84■■□□□ 1.73
ECHDC3-201ENST00000379215 CTNNA2P26232 953 aa25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 MAP3K7CLP57077 242 aa25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 CCDC142Q17RM4 750 aa25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 SIX6OS1Q8N1H7 587 aa25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 COLGALT1Q8NBJ5 622 aa25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 ZBED2Q9BTP6 218 aa25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 PACSIN2Q9UNF0 486 aaPredicted RBP25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 SLC4A7Q9Y6M7 1214 aa25.83■■□□□ 1.73
ECHDC3-201ENST00000379215 KCNK3O14649 394 aa25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 PAPSS1O43252 624 aaPredicted RBP25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 CTNNA1P35221 906 aaKnown RBP25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 TERF1P54274 439 aa25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 SLC39A12Q504Y0 691 aa25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 SLC26A9Q7LBE3 791 aa25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 LRRTM3Q86VH5 581 aa25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 C2orf15Q8WU43 125 aaKnown RBP25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 BCL7CQ8WUZ0 217 aaPredicted RBP25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 SMOQ99835 787 aa25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 CARD9Q9H257 536 aa25.82■■□□□ 1.72
ECHDC3-201ENST00000379215 SOD2P04179 222 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 CLUL1Q15846 466 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 EFHC1Q5JVL4 640 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 VSTM1Q6UX27 236 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 TMCO2Q7Z6W1 182 aaPredicted RBP25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 FIBCD1Q8N539 461 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 CD101Q93033 1021 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 RPGRIP1Q96KN7 1286 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 TMEM209Q96SK2 561 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 NCAPGQ9BPX3 1015 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 PLVAPQ9BX97 442 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 TRIM7Q9C029 511 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 TMLHEQ9NVH6 421 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 ASNSD1Q9NWL6 643 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 PCDHB5Q9Y5E4 795 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 PCDHB12Q9Y5F1 795 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 BACE2Q9Y5Z0 518 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 PSTPIP1O43586 416 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 LCP1P13796 627 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 BDNFP23560 247 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 PSMA2P25787 234 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 RFC1P35251 1148 aaPredicted RBP25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 PAFAH1B1P43034 410 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 ADIGQ0VDE8 80 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 RTP2Q5QGT7 225 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 CCDC181Q5TID7 509 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 KIAA1841Q6NSI8 718 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 SCUBE3Q8IX30 993 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 PIK3R5Q8WYR1 880 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 HERC2P3Q9BVR0 1158 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 CNGB3Q9NQW8 809 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 CHST7Q9NS84 486 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 TMEM59LQ9UK28 342 aa25.81■■□□□ 1.72
ECHDC3-201ENST00000379215 TBC1D4O60343 1298 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 SRGAP2O75044 1071 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 BEST1O76090 585 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 GJB6O95452 261 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 GLI1P08151 1106 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 SYN1P17600 705 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 GPD1P21695 349 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 MAGEA11P43364 429 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 DNA2P51530 1060 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 EPHB4P54760 987 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 RAB41Q5JT25 222 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 GPR65Q8IYL9 337 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 DPF3Q92784 378 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 RAD9AQ99638 391 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 MTRRQ9UBK8 725 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 PCDHA3Q9Y5H8 950 aa25.8■■□□□ 1.72
ECHDC3-201ENST00000379215 PIK3R2O00459 728 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms