RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 CCDC114Q96M63 670 aa17.75■□□□□ 0.43
PTPN20-203ENST00000374342 FAM118BQ9BPY3 351 aa17.75■□□□□ 0.43
PTPN20-203ENST00000374342 ASNSD1Q9NWL6 643 aa17.75■□□□□ 0.43
PTPN20-203ENST00000374342 SNX24Q9Y343 169 aa17.75■□□□□ 0.43
PTPN20-203ENST00000374342 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.75■□□□□ 0.43
PTPN20-203ENST00000374342 SQORQ9Y6N5 450 aa17.75■□□□□ 0.43
PTPN20-203ENST00000374342 C2CD4BA6NLJ0 364 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 PAPSS1O43252 624 aaPredicted RBP17.74■□□□□ 0.43
PTPN20-203ENST00000374342 PDGFRAP16234 1089 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 SLC6A3Q01959 620 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 KRT17Q04695 432 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 GRIK3Q13003 919 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 MBTPS1Q14703 1052 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 PPP1R7Q15435 360 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 CDO1Q16878 200 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 KCNT1Q5JUK3 1230 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 TRAF7Q6Q0C0 670 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 TMEM110Q86TL2 294 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 ECHDC2Q86YB7 292 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 SCUBE3Q8IX30 993 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 SLC43A3Q8NBI5 491 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 STK32AQ8WU08 396 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 CNPY3Q9BT09 278 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 B3GNT5Q9BYG0 378 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 SAGE1Q9NXZ1 904 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 DDX43Q9NXZ2 648 aaKnown RBP17.74■□□□□ 0.43
PTPN20-203ENST00000374342 PCSK1NQ9UHG2 260 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 PHF24Q9UPV7 400 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 TIMM13Q9Y5L4 95 aaPredicted RBP17.74■□□□□ 0.43
PTPN20-203ENST00000374342 hCG_1818297A0A087WSY0 165 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 POLR3GO15318 223 aaPredicted RBP17.74■□□□□ 0.43
PTPN20-203ENST00000374342 GABBR2O75899 941 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 SKIP12755 728 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 LCP1P13796 627 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 MIPP30301 263 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 RPL9P32969 192 aaKnown RBP17.74■□□□□ 0.43
PTPN20-203ENST00000374342 AARSP49588 968 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTPN20-203ENST00000374342 CDR1P51861 262 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 COPS2P61201 443 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 TAF5Q15542 800 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 C15orf59Q2T9L4 293 aaPredicted RBP17.74■□□□□ 0.43
PTPN20-203ENST00000374342 PAN2Q504Q3 1202 aaKnown RBP17.74■□□□□ 0.43
PTPN20-203ENST00000374342 MDH1BQ5I0G3 518 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 MREGQ8N565 214 aa17.74■□□□□ 0.43
PTPN20-203ENST00000374342 ARVCFO00192 962 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 CLDN5O00501 218 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 GABRDO14764 452 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 HSF2BPO75031 334 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 MYCP01106 439 aaPredicted RBP17.73■□□□□ 0.43
PTPN20-203ENST00000374342 PTPN1P18031 435 aaKnown RBP17.73■□□□□ 0.43
PTPN20-203ENST00000374342 PTPN7P35236 360 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 CDKN2BP42772 138 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 RPL21P46778 160 aaKnown RBP17.73■□□□□ 0.43
PTPN20-203ENST00000374342 ADCY2Q08462 1091 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 ACAP1Q15027 740 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 UPP1Q16831 310 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 TFDP3Q5H9I0 405 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 SH3PXD2AQ5TCZ1 1133 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 TMEM86AQ8N2M4 240 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 CLEC4CQ8WTT0 213 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 CFAP57Q96MR6 1250 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 SYT15Q9BQS2 421 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 MED10Q9BTT4 135 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 USP18Q9UMW8 372 aa17.73■□□□□ 0.43
PTPN20-203ENST00000374342 I3L4J1 428 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 TJP3O95049 919 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 GGCXP38435 758 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 RAB6CQ53S08 254 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 ZDHHC17Q8IUH5 632 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 FUKQ8N0W3 1084 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 HASPINQ8TF76 798 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 GRK7Q8WTQ7 553 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 HSPH1Q92598 858 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 SLCO2A1Q92959 643 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 RUFY1Q96T51 708 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 FMO2Q99518 471 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 HNRNPABQ99729 332 aaKnown RBP17.72■□□□□ 0.43
PTPN20-203ENST00000374342 RAB6CQ9H0N0 254 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 UNC93B1Q9H1C4 597 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 UBN1Q9NPG3 1134 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 HOMER3Q9NSC5 361 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 GRHL1Q9NZI5 618 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 BRCA2P51587 3418 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 TANC1Q9C0D5 1861 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 C3orf70A6NLC5 250 aaPredicted RBP17.72■□□□□ 0.43
PTPN20-203ENST00000374342 DPYSL4O14531 572 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 TRUB2O95900 331 aaKnown RBP17.72■□□□□ 0.43
PTPN20-203ENST00000374342 GAS8O95995 478 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 YY1P25490 414 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 HSPA9P38646 679 aaKnown RBP17.72■□□□□ 0.43
PTPN20-203ENST00000374342 ATP11AP98196 1134 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 TUSC3Q13454 348 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 CCNG2Q16589 344 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 TIGD5Q53EQ6 642 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 KIAA0319Q5VV43 1072 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 ZNF598Q86UK7 904 aaKnown RBP17.72■□□□□ 0.43
PTPN20-203ENST00000374342 LINC01599Q8WXQ3 324 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 HAUS1Q96CS2 278 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 PEBP4Q96S96 227 aa17.72■□□□□ 0.43
PTPN20-203ENST00000374342 MED4Q9NPJ6 270 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms