RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TMEM237Q96Q45 408 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 PIGSQ96S52 555 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 PRDM4Q9UKN5 801 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 GLRA3O75311 464 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 RTN3O95197 1032 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-201ENST00000371817 JAK3P52333 1124 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 ARPP19P56211 112 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 OSCP1Q8WVF1 389 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 TRIM17Q9Y577 477 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 ARHGEF10O15013 1369 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 SYTL3Q4VX76 610 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 ERO1BQ86YB8 467 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 SYTL5Q8TDW5 730 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-201ENST00000371817 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 OLR1P78380 273 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 DCAF15Q66K64 600 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 SCARA3Q6AZY7 606 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 FAM213AQ9BRX8 229 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 CLIC5Q9NZA1 410 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 CD109Q6YHK3 1445 aa15.79■□□□□ 0.12
COL5A1-201ENST00000371817 ECE2O60344 883 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 IL12AP29459 219 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 MAGEA2P43356 314 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 GALCP54803 685 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 USF2Q15853 346 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 MZT2AQ6P582 158 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 FAM172AQ8WUF8 416 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 BORCS5Q969J3 196 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 TMEM138Q9NPI0 162 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 FAM220BPB1ANY3 271 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 HOXC9P31274 260 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 BTDP43251 543 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 NECTIN1Q15223 517 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 AFG1LQ8WV93 481 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 PRKAR1AP10644 381 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 MSH3P20585 1137 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 CRKP46108 304 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 RXRGP48443 463 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 TRAPPC11Q7Z392 1133 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 KDELC2Q7Z4H8 507 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 ZDHHC13Q8IUH4 622 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 EZH1Q92800 747 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 C18orf8Q96DM3 657 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 SH3BP4Q9P0V3 963 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 SLC39A10Q9ULF5 831 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 GAS2O43903 313 aaKnown RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 ADD2P35612 726 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 CASP12Q6UXS9 341 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 TDRD5Q8NAT2 981 aaKnown RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 APEX2Q9UBZ4 518 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 AK5Q9Y6K8 562 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 CIAO1O76071 339 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 EPHB2P29323 1055 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 GYG1P46976 350 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 HNMTP50135 292 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 GTF2IP78347 998 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 VAC14Q08AM6 782 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 TYSND1Q2T9J0 566 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 DENND1BQ6P3S1 775 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 IP6K1Q92551 441 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 PROX1Q92786 737 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 SRP68Q9UHB9 627 aaKnown RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 DUSP12Q9UNI6 340 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 MAPRE3Q9UPY8 281 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 INPP4BO15327 924 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 PLOD3O60568 738 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 NR1H2P55055 460 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 CHRNDQ07001 517 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 NFYCQ13952 458 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 Q3C1V9 767 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 MIER2Q8N344 545 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 RNASE11Q8TAA1 199 aaKnown RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 OTUD5Q96G74 571 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 LAMC1P11047 1609 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 NOS1APO75052 506 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 ATP5BP06576 529 aaKnown RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 SRGNP10124 158 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 GSSP48637 474 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 USP11P51784 963 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 ATP6AP1LQ52LC2 224 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 NEK5Q6P3R8 708 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 CABLES1Q8TDN4 633 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 AP3S1Q92572 193 aa15.78■□□□□ 0.12
COL5A1-201ENST00000371817 L3MBTL3Q96JM7 780 aaPredicted RBP15.78■□□□□ 0.12
COL5A1-201ENST00000371817 IFNA14P01570 189 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 MAPK6Q16659 721 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 C5orf22Q49AR2 442 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 USP17L2Q6R6M4 530 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 VN1R5Q7Z5H4 357 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 CCDC185Q8N715 623 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 SLITRK2Q9H156 845 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 CFAP74Q9C0B2 1584 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 LDLRP01130 860 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 IL13P35225 146 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 CLEC16AQ2KHT3 1053 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 DHRSXQ8N5I4 330 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 SAR1AQ9NR31 198 aa15.77■□□□□ 0.12
COL5A1-201ENST00000371817 POTEMA6NI47 508 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms