RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 NOTUMQ6P988 496 aa13.46□□□□□ -0.26
GPC3-201ENST00000370818 SLC30A9Q6PML9 568 aa13.46□□□□□ -0.26
GPC3-201ENST00000370818 CCDC197Q8NCU1 140 aa13.46□□□□□ -0.26
GPC3-201ENST00000370818 ATL2Q8NHH9 583 aa13.46□□□□□ -0.26
GPC3-201ENST00000370818 DNAJB3Q8WWF6 145 aa13.46□□□□□ -0.26
GPC3-201ENST00000370818 HEXIM2Q96MH2 286 aaKnown RBP13.46□□□□□ -0.26
GPC3-201ENST00000370818 GJD2Q9UKL4 321 aa13.46□□□□□ -0.26
GPC3-201ENST00000370818 NOVA2Q9UNW9 492 aaKnown RBP13.46□□□□□ -0.26
GPC3-201ENST00000370818 CFAP73A6NFT4 308 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 DCDC2CA8MYV0 355 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 TREHO43280 583 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 HMGCRP04035 888 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 VDRP11473 427 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 PSEN2P49810 448 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 BEX3Q00994 111 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 PTK6Q13882 451 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 AGBL2Q5U5Z8 902 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 ALKAL1Q6UXT8 129 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 DRAXINQ8NBI3 349 aaPredicted RBP13.45□□□□□ -0.26
GPC3-201ENST00000370818 ACSF2Q96CM8 615 aaPredicted RBP13.45□□□□□ -0.26
GPC3-201ENST00000370818 RBM41Q96IZ5 413 aaKnown RBP13.45□□□□□ -0.26
GPC3-201ENST00000370818 NXF3Q9H4D5 531 aaKnown RBP13.45□□□□□ -0.26
GPC3-201ENST00000370818 TUBGCP4Q9UGJ1 667 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 M0QYV0 167 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 KRT1P04264 644 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 SHBGP04278 402 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 NUDT17P0C025 328 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 GABRB2P47870 512 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
GPC3-201ENST00000370818 PDCD2Q16342 344 aaPredicted RBP13.45□□□□□ -0.26
GPC3-201ENST00000370818 CWF19L1Q69YN2 538 aaKnown RBP13.45□□□□□ -0.26
GPC3-201ENST00000370818 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 RHBDF2Q6PJF5 856 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 EMC1Q8N766 993 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 FNIP1Q8TF40 1166 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 CHMP6Q96FZ7 201 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 SEMA4AQ9H3S1 761 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 RNF19AQ9NV58 838 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 WHRNQ9P202 907 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 MTRF1LQ9UGC7 380 aaKnown RBP13.45□□□□□ -0.26
GPC3-201ENST00000370818 DERAQ9Y315 318 aa13.45□□□□□ -0.26
GPC3-201ENST00000370818 LRCH4O75427 683 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 PSMA2P25787 234 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 PAPOLAP51003 745 aaKnown RBP13.44□□□□□ -0.26
GPC3-201ENST00000370818 SLC25A11Q02978 314 aaKnown RBP13.44□□□□□ -0.26
GPC3-201ENST00000370818 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 KAZNQ674X7 775 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 SYDE1Q6ZW31 735 aaPredicted RBP13.44□□□□□ -0.26
GPC3-201ENST00000370818 IFNL1Q8IU54 200 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 C12orf29Q8N999 325 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 UBA3Q8TBC4 463 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 GRK7Q8WTQ7 553 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 C18orf25Q96B23 403 aaPredicted RBP13.44□□□□□ -0.26
GPC3-201ENST00000370818 FAM129AQ9BZQ8 928 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 FAM124BQ9H5Z6 455 aaPredicted RBP13.44□□□□□ -0.26
GPC3-201ENST00000370818 AAASQ9NRG9 546 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 ASIC3Q9UHC3 531 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 NME7Q9Y5B8 376 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 CITO14578 2027 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 GAS8O95995 478 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 NEFHP12036 1026 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 CCND1P24385 295 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 IL1R2P27930 398 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 CPT1AP50416 773 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 MAGOHP61326 146 aaKnown RBP13.44□□□□□ -0.26
GPC3-201ENST00000370818 CALCOCO2Q13137 446 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 SNX17Q15036 470 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 PCBP1Q15365 356 aaKnown RBP eCLIP13.44□□□□□ -0.264e-20■■□□□ 13.9
GPC3-201ENST00000370818 ZFYVE27Q5T4F4 411 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 ERMARDQ5T6L9 678 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 SPOCD1Q6ZMY3 1216 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 PIGWQ7Z7B1 504 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 SAPCD2Q86UD0 394 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 ZNF317Q96PQ6 595 aaPredicted RBP13.44□□□□□ -0.26
GPC3-201ENST00000370818 NT5C1AQ9BXI3 368 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 METTL5Q9NRN9 209 aaKnown RBP13.44□□□□□ -0.26
GPC3-201ENST00000370818 CNTN3Q9P232 1028 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
GPC3-201ENST00000370818 C3orf70A6NLC5 250 aaPredicted RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 RECQL4O94761 1208 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 PFKMP08237 780 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 MYL3P08590 195 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 AKAP5P24588 427 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 RGS2P41220 211 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 CDKN2BP42772 138 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 SLC29A2Q14542 456 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 LCLAT1Q6UWP7 414 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 POLNQ7Z5Q5 900 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 APBB1IPQ7Z5R6 666 aaPredicted RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 MFN1Q8IWA4 741 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 MDM1Q8TC05 714 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 MCRS1Q96EZ8 462 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 XPO6Q96QU8 1125 aaKnown RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 MRPL45Q9BRJ2 306 aaKnown RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 SYNCQ9H7C4 482 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 PAPOLBQ9NRJ5 636 aaKnown RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 ZFATQ9P243 1243 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 TSPAN16Q9UKR8 245 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms