RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 INTS8Q75QN2 995 aaKnown RBP4.27□□□□□ -1.73
USH2A-202ENST00000366942 RFX6Q8HWS3 928 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 RIOX2Q8IUF8 465 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 KREMEN2Q8NCW0 462 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 KLHL6Q8WZ60 621 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 DPF1Q92782 380 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 TMEM74Q96NL1 305 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 PTCHD1Q96NR3 888 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 GBP5Q96PP8 586 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 FEM1AQ9BSK4 669 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 DSCC1Q9BVC3 393 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 FBRSL1Q9HCM7 1045 aaKnown RBP4.27□□□□□ -1.73
USH2A-202ENST00000366942 PNPLA8Q9NP80 782 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 CHCHD3Q9NX63 227 aaKnown RBP4.27□□□□□ -1.73
USH2A-202ENST00000366942 CLIC5Q9NZA1 410 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 STAP2Q9UGK3 403 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 PCDHA6Q9UN73 950 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 HPSEQ9Y251 543 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 DAGLAQ9Y4D2 1042 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 PCDHA8Q9Y5H6 950 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 RBM8AQ9Y5S9 174 aaKnown RBP4.27□□□□□ -1.73
USH2A-202ENST00000366942 SNX8Q9Y5X2 465 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 WDR19Q8NEZ3 1342 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 ZNF521Q96K83 1311 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 NEDD4P46934 1319 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 WASHC1A8K0Z3 465 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 WASH3PC4AMC7 463 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 ATP5JP18859 108 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 NRIP1P48552 1158 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 USP11P51784 963 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 TUBB4BP68371 445 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 INSCQ1MX18 579 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 FNBP1LQ5T0N5 605 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 NFRKBQ6P4R8 1299 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 DCLRE1AQ6PJP8 1040 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 WASH2PQ6VEQ5 465 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 PTAR1Q7Z6K3 402 aaPredicted RBP4.27□□□□□ -1.73
USH2A-202ENST00000366942 GALNT7Q86SF2 657 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 ZSCAN30Q86W11 494 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 TMEM86AQ8N2M4 240 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 TTC13Q8NBP0 860 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 KCNE4Q8WWG9 221 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 ATXN2LQ8WWM7 1075 aaKnown RBP4.27□□□□□ -1.73
USH2A-202ENST00000366942 TTYH3Q9C0H2 523 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 AGAP1Q9UPQ3 857 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 PCDHAC2Q9Y5I4 1007 aa4.27□□□□□ -1.73
USH2A-202ENST00000366942 B2RBV5 119 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 APBB3O95704 486 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 CLIC3O95833 236 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 NCAM1P13591 858 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 CARTPTQ16568 116 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 TTMPQ5BVD1 217 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 BEND3Q5T5X7 828 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 ZNF746Q6NUN9 644 aaPredicted RBP4.26□□□□□ -1.73
USH2A-202ENST00000366942 C11orf88Q6PI97 169 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 KRT222Q8N1A0 295 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 C10orf53Q8N6V4 93 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 HJURPQ8NCD3 748 aaPredicted RBP4.26□□□□□ -1.73
USH2A-202ENST00000366942 HMGB4Q8WW32 186 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 STAMBPL1Q96FJ0 436 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 FAM213AQ9BRX8 229 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 MXD3Q9BW11 206 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 CAPS2Q9BXY5 557 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 ADGRE3Q9BY15 652 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 ASPSCR1Q9BZE9 553 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 C3orf14Q9HBI5 128 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 PDE7BQ9NP56 450 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 CASS4Q9NQ75 786 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 ACSS2Q9NR19 701 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 BFARQ9NZS9 450 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.26□□□□□ -1.73
USH2A-202ENST00000366942 ORC6Q9Y5N6 252 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 HGSO14964 777 aaPredicted RBP4.26□□□□□ -1.73
USH2A-202ENST00000366942 GFPT2O94808 682 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 IL1BP01584 269 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 RASA1P20936 1047 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 NDUFS1P28331 727 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 SERPINA4P29622 427 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 GSTT1P30711 240 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 ARHGDIBP52566 201 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 CACNB2Q08289 660 aaPredicted RBP4.26□□□□□ -1.73
USH2A-202ENST00000366942 RCAN2Q14206 197 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 EPC2Q52LR7 807 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 TFDP3Q5H9I0 405 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 CERCAMQ5T4B2 595 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 RAPH1Q70E73 1250 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 MPP5Q8N3R9 675 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 GMCL1P1Q8NEA9 526 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 BTN2A2Q8WVV5 523 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 GATAD2BQ8WXI9 593 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 KRT35Q92764 455 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 CELF1Q92879 486 aaKnown RBP4.26□□□□□ -1.73
USH2A-202ENST00000366942 GSDMAQ96QA5 445 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 MTA3Q9BTC8 594 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 BBS2Q9BXC9 721 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 C17orf75Q9HAS0 396 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 HOMER3Q9NSC5 361 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 GLS2Q9UI32 602 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 SYNPO2Q9UMS6 1093 aa4.26□□□□□ -1.73
USH2A-202ENST00000366942 MAP3K1Q13233 1512 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms