RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 FMO1Q01740 532 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 HIC1Q14526 733 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 EMC10Q5UCC4 262 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 C3orf62Q6ZUJ4 267 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZDHHC17Q8IUH5 632 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CYP2W1Q8TAV3 490 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF398Q8TD17 642 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 USP33Q8TEY7 942 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZC3H15Q8WU90 426 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 KRT35Q92764 455 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 CATSPER2Q96P56 530 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 NINJ2Q9NZG7 142 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MYH1P12882 1939 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MYH2Q9UKX2 1941 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 MYH4Q9Y623 1939 aa5.59□□□□□ -1.51
CDC42BPA-204ENST00000366767 H0Y626 953 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 PFDN6O15212 129 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 PECAM1P16284 738 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 SAT1P21673 171 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 ARHGDIAP52565 204 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 CDH6P55285 790 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 RAB14P61106 215 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 LLGL1Q15334 1064 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 MIEF2Q96C03 454 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 CFAP36Q96G28 342 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 FAXDC2Q96IV6 333 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 TNIP3Q96KP6 325 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 TSSK1BQ9BXA7 367 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 DEFB129Q9H1M3 183 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 GPRC5CQ9NQ84 441 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 SYBUQ9NX95 663 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 PHTF1Q9UMS5 762 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 TUBGCP6Q96RT7 1819 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 NFIBO00712 420 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 CST8O60676 142 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 ATP6V1G2O95670 118 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 HMGCS2P54868 508 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 DSG1Q02413 1049 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 SWT1Q5T5J6 900 aaKnown RBP5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 TMEM161BQ8NDZ6 487 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 EPS8L3Q8TE67 593 aaKnown RBP5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 TRIM63Q969Q1 353 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 GRID1Q9ULK0 1009 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 TRIM33Q9UPN9 1127 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 COQ4Q9Y3A0 265 aa5.59□□□□□ -1.52
CDC42BPA-204ENST00000366767 IGF2BP3O00425 579 aaKnown RBP eCLIP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SEC24DO94855 1032 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PAEPP09466 180 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 OSTNP61366 133 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 BRSK2Q8IWQ3 736 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MDM1Q8TC05 714 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SPATA33Q96N06 139 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 TARS2Q9BW92 718 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 RNPEPQ9H4A4 650 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 RPL26L1Q9UNX3 145 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 CD4P01730 458 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PDGFRAP16234 1089 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PAMP19021 973 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 VCAM1P19320 739 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 CYP1B1Q16678 543 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 RNF43Q68DV7 783 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MFSD5Q6N075 450 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 CRELD2Q6UXH1 353 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PLD3Q8IV08 490 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 CCDC103Q8IW40 242 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 C7orf31Q8N865 590 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 C12orf50Q8NA57 414 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 CCT7Q99832 543 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 NT5C1AQ9BXI3 368 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 FAM124BQ9H5Z6 455 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 STARD13Q9Y3M8 1113 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PAPPAQ13219 1627 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 ADAMTS3O15072 1205 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 WDR47O94967 919 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 DLGAP3O95886 979 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 KITP10721 976 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 RBP3P10745 1247 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 RAB44Q7Z6P3 723 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 VSIG10LQ86VR7 867 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZCCHC9Q8N567 271 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PRELID2Q8N945 189 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 BRD8Q9H0E9 1235 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SMYD2Q9NRG4 433 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PKD2L2Q9NZM6 624 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 NAALADL1Q9UQQ1 740 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 RNF103-CHMP3A0A140T963 221 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SNX3O60493 162 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 TSPAN9O75954 239 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 S100A5P33763 92 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 FDFT1P37268 417 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 SKIV2L2P42285 1042 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 MMP13P45452 471 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 ZACNQ401N2 412 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 DPP9Q86TI2 863 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PPM1NQ8N819 430 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 CCNYQ8ND76 341 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 FAM81AQ8TBF8 368 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 DDI1Q8WTU0 396 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 C17orf50Q8WW18 174 aa5.58□□□□□ -1.52
CDC42BPA-204ENST00000366767 PPP1R14BQ96C90 147 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms