RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 AMFRQ9UKV5 643 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ATP8A1Q9Y2Q0 1164 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TMX2Q9Y320 296 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PCDHA3Q9Y5H8 950 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ZMYM2Q9UBW7 1377 aa2.3□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CD8B2A6NJW9 211 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 H3BNX3 289 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SNUPNO95149 360 aaKnown RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 GRPP07492 148 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PDHA1P08559 390 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 NHLRC4P0CG21 123 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TYRP14679 529 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SFPQP23246 707 aaKnown RBP eCLIP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CDC25AP30304 524 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PRKAR1BP31321 381 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 RECQLP46063 649 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 RENBPP51606 427 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 GUCY2FP51841 1108 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 LILRA4P59901 499 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 RPS13P62277 151 aaKnown RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 HSF1Q00613 529 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KRT17Q04695 432 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 DAB2IPQ5VWQ8 1189 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 FCRL6Q6DN72 434 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 DDX42Q86XP3 938 aaKnown RBP eCLIP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ANKRD13BQ86YJ7 626 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ADHFE1Q8IWW8 467 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CBARPQ8N350 705 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ARFGAP1Q8N6T3 406 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ACRBPQ8NEB7 543 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 OSR1Q8TAX0 266 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MTMR8Q96EF0 704 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 THAP7Q9BT49 309 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TRMOQ9BU70 441 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 C1orf43Q9BWL3 253 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ZCWPW1Q9H0M4 648 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 FOXP1Q9H334 677 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MTMR4Q9NYA4 1195 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KLHL13Q9P2N7 655 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TRHDEQ9UKU6 1024 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 NDRG4Q9ULP0 352 aaKnown RBP2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 AGAP1Q9UPQ3 857 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 HS3ST3B1Q9Y662 390 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SQORQ9Y6N5 450 aa2.29□□□□□ -2.04
RNU6-1048P-201ENST00000364054 LY6G6EA0A0G2JKS1 128 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PRSS29PA6NIE9 313 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 H3BUI4 141 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 FCHO1O14526 889 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ERC2O15083 957 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KRT86O43790 486 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ABLIM3O94929 683 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 UNC5CO95185 931 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MT-CO3P00414 261 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CRYABP02511 175 aaKnown RBP2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CD63P08962 238 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PDCP20941 246 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MT3P25713 68 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 MTHFSP49914 203 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TOB1P50616 345 aaPredicted RBP2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PRKAG1P54619 331 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SRSF1Q07955 248 aaKnown RBP eCLIP2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KRT81Q14533 505 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PTPN21Q16825 1174 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ABCB5Q2M3G0 1257 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PGS1Q32NB8 556 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KHDC1LQ5JSQ8 128 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CERCAMQ5T4B2 595 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 TMEM65Q6PI78 240 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 C9orf47Q6ZRZ4 202 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 USP45Q70EL2 814 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 IRF2BP2Q7Z5L9 587 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 UBE2Q1Q7Z7E8 422 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 CAND1Q86VP6 1230 aaKnown RBP2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 IZUMO1Q8IYV9 350 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SPARTQ8N0X7 666 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 NRACQ8N912 160 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ZNF398Q8TD17 642 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 ZFYVE19Q96K21 471 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 HS6ST2Q96MM7 605 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SIGLEC11Q96RL6 698 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 EFHD1Q9BUP0 239 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 PIH1D1Q9NWS0 290 aaKnown RBP2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 USP22Q9UPT9 525 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 SSX2IPQ9Y2D8 614 aa2.28□□□□□ -2.04
RNU6-1048P-201ENST00000364054 GABRDO14764 452 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 TMPRSS11DO60235 418 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PCDHGA12O60330 932 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 FGAP02671 866 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 PRF1P14222 555 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 AKAP5P24588 427 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 THBS3P49746 956 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 SOX8P57073 446 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ZNF91Q05481 1191 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 ERV3-1Q14264 604 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 DEPDC1Q5TB30 811 aa2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 LMBRD2Q68DH5 695 aaPredicted RBP2.27□□□□□ -2.05
RNU6-1048P-201ENST00000364054 MEPCEQ7L2J0 689 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms