RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 ZSWIM3Q96MP5 696 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MED15Q96RN5 788 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLF1Q9BQI6 1058 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 NUDT22Q9BRQ3 303 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ARHGAP39Q9C0H5 1083 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RNF32Q9H0A6 362 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZCWPW1Q9H0M4 648 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC6A17Q9H1V8 727 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 KCNH6Q9H252 994 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC25A32Q9H2D1 315 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 NELFAQ9H3P2 528 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 BARX1Q9HBU1 254 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 EIF2B3Q9NR50 452 aaKnown RBP4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TPSG1Q9NRR2 321 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TMLHEQ9NVH6 421 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 FBXO34Q9NWN3 711 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PLA2G3Q9NZ20 509 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 DNMT3BQ9UBC3 853 aaKnown RBP4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 AGAP1Q9UPQ3 857 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 HPSEQ9Y251 543 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ATP11BQ9Y2G3 1177 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 DNAJC16Q9Y2G8 782 aa4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RBM8AQ9Y5S9 174 aaKnown RBP4.14□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CXorf49A8MYA2 514 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 H7C0S8 307 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 J3KTA2 159 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 AP3D1O14617 1153 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 KIAA0355O15063 1070 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RRP9O43818 475 aaKnown RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 GUCY1B2O75343 617 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TSPAN9O75954 239 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SASH1O94885 1247 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 POMCP01189 267 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 APOA4P06727 396 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PORP16435 677 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 FBLN1P23142 703 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 LRPAP1P30533 357 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC6A4P31645 630 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 AKT1P31749 480 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ACTN2P35609 894 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CASRP41180 1078 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PAFAH1B1P43034 410 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CCT4P50991 539 aaKnown RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RPP30P78346 268 aaKnown RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 GALNT2Q10471 571 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 GRM4Q14833 912 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 NFIXQ14938 502 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 IQCB1Q15051 598 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PCOLCEQ15113 449 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MANEALQ5VSG8 457 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SNX30Q5VWJ9 437 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 KRT40Q6A162 431 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC30A6Q6NXT4 461 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZNF574Q6ZN55 896 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SYT13Q7L8C5 426 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PPP1R32Q7Z5V6 425 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 VSIG10LQ86VR7 867 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 DIS3L2Q8IYB7 885 aaKnown RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CMTM4Q8IZR5 234 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ADSSL1Q8N142 457 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 KYQ8NBH2 561 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CCDC191Q8NCU4 936 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SMARCC2Q8TAQ2 1214 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ABHD5Q8WTS1 349 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CUL5Q93034 780 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CEP95Q96GE4 821 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 APOPT1Q96IL0 206 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 RADILQ96JH8 1075 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZNF668Q96K58 619 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 FUZQ9BT04 418 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 C11orf84Q9BUA3 381 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC46A2Q9BY10 475 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC6A15Q9H2J7 730 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 GSTO2Q9H4Y5 243 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 HESX1Q9UBX0 185 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SLC45A2Q9UMX9 530 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SHOC2Q9UQ13 582 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CNTN6Q9UQ52 1028 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 CDY1Q9Y6F8 540 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 IRS2Q9Y4H2 1338 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZMYM3Q14202 1370 aa4.13□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TSPY2A6NKD2 308 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 H3BNC9 293 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ZSCAN9O15535 394 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 SEPT4O43236 478 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PPP6R2O75170 966 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 AGFG2O95081 481 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 KIF20AO95235 890 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 LARGE1O95461 756 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 F9P00740 461 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TGFB1P01137 390 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TSPY3P0CV98 308 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 TSPY8P0CW00 308 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 ARP10275 920 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 LAMP2P13473 410 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MLH1P40692 756 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 UBA7P41226 1012 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 MRE11P49959 708 aa4.12□□□□□ -1.75
RNU6-1249P-201ENST00000363237 PTTG1IPP53801 180 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms