RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CYP3A43Q9HB55 503 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 PCSK1NQ9UHG2 260 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 TTC7AQ9ULT0 858 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-202ENST00000358966 HPCAL4Q9UM19 191 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 INPP5FQ9Y2H2 1132 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 SCINQ9Y6U3 715 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 GABBR2O75899 941 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 KRT3P12035 628 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 NEFHP12036 1026 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 ATF7P17544 494 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-202ENST00000358966 IL1R2P27930 398 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 AXLP30530 894 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 GBP2P32456 591 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-202ENST00000358966 CLCNKBP51801 687 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 LILRA4P59901 499 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 DR1Q01658 176 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 PPARDQ03181 441 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 MGAT3Q09327 533 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 FAM102AQ5T9C2 384 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-202ENST00000358966 AGMOQ6ZNB7 445 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 OSTM1Q86WC4 334 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 CD302Q8IX05 232 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 SCUBE3Q8IX30 993 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 IFT20Q8IY31 132 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 NDRG1Q92597 394 aaKnown RBP13.3□□□□□ -0.28
GGPS1-202ENST00000358966 VCPIP1Q96JH7 1222 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 MIS12Q9H081 205 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 CLDN5O00501 218 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 MED7O43513 233 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 PYGBP11216 843 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 PSMA2P25787 234 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
GGPS1-202ENST00000358966 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
GGPS1-202ENST00000358966 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.29□□□□□ -0.28
GGPS1-202ENST00000358966 RAPGEF5Q92565 580 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 ARL5CA6NH57 179 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 CCDC188H7C350 402 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 VDRP11473 427 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 EZRP15311 586 aaKnown RBP13.29□□□□□ -0.28
GGPS1-202ENST00000358966 TKTP29401 623 aaKnown RBP13.29□□□□□ -0.28
GGPS1-202ENST00000358966 VPS41P49754 854 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 IRAK1P51617 712 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 APLP1P51693 650 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 LPIN1Q14693 890 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 GLE1Q53GS7 698 aaKnown RBP13.29□□□□□ -0.28
GGPS1-202ENST00000358966 MAP3K21Q5TCX8 1036 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 FAM183BPQ6ZVS7 135 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 APBB1IPQ7Z5R6 666 aaPredicted RBP13.29□□□□□ -0.28
GGPS1-202ENST00000358966 NT5DC4Q86YG4 428 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 SAE1Q9UBE0 346 aaPredicted RBP13.29□□□□□ -0.28
GGPS1-202ENST00000358966 SNX24Q9Y343 169 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 TET1Q8NFU7 2136 aa13.29□□□□□ -0.28
GGPS1-202ENST00000358966 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 KPNA6O60684 536 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 SHOX2O60902 331 aaPredicted RBP13.28□□□□□ -0.28
GGPS1-202ENST00000358966 CD48P09326 243 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 SETSIPP0DME0 302 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 E2F5Q15329 346 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 CNGA2Q16280 664 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 UBAP2Q5T6F2 1119 aaKnown RBP13.28□□□□□ -0.28
GGPS1-202ENST00000358966 WSCD1Q658N2 575 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 OR6B2Q6IFH4 312 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 MFSD7Q6UXD7 560 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 RSPH3Q86UC2 560 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 JAMLQ86YT9 394 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 CCDC105Q8IYK2 499 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
GGPS1-202ENST00000358966 LHX5Q9H2C1 402 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 PHF2O75151 1096 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 LRCH4O75427 683 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 KIAA0754O94854 1291 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 SYF2O95926 243 aaKnown RBP13.28□□□□□ -0.28
GGPS1-202ENST00000358966 KCNE1P15382 129 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 TFE3P19532 575 aaPredicted RBP13.28□□□□□ -0.28
GGPS1-202ENST00000358966 GGCXP38435 758 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 SLC8A3P57103 927 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 DYNLT1P63172 113 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 ATP11AP98196 1134 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 MBTPS1Q14703 1052 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 KIAA0319Q5VV43 1072 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
GGPS1-202ENST00000358966 RHOT1Q8IXI2 618 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 LRRC52Q8N7C0 313 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 SLC2A14Q8TDB8 520 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 ADAM2Q99965 735 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 ZNF518BQ9C0D4 1074 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 C10orf88Q9H8K7 445 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 IP6K2Q9UHH9 426 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 DERAQ9Y315 318 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 PTCH2Q9Y6C5 1203 aa13.28□□□□□ -0.28
GGPS1-202ENST00000358966 KRT1P04264 644 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 GNL1P36915 607 aaPredicted RBP13.27□□□□□ -0.28
GGPS1-202ENST00000358966 TAF6P49848 677 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 EPHB4P54760 987 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 PAK2Q13177 524 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 PCBP1Q15365 356 aaKnown RBP eCLIP13.27□□□□□ -0.28
GGPS1-202ENST00000358966 XKR4Q5GH76 650 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 B4GALNT4Q76KP1 1039 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 ADGRF2Q8IZF7 708 aa13.27□□□□□ -0.28
GGPS1-202ENST00000358966 ZNF784Q8NCA9 323 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms