RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 NOL9Q5SY16 702 aaKnown RBP10.56□□□□□ -0.72
CLIP1-202ENST00000358808 RESP18Q5W5W9 173 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 SIRT2Q8IXJ6 389 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 CYP4Z2PQ8N1L4 340 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 B3GALNT2Q8NCR0 500 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 ATL2Q8NHH9 583 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 SLC30A5Q8TAD4 765 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 FAM45AQ8TCE6 357 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 KIFC1Q9BW19 673 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 KLHL25Q9H0H3 589 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 SERHL2Q9H4I8 314 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 SERHLQ9NQF3 203 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 RGS18Q9NS28 235 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 MGAT4DA6NG13 374 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 CASP1P29466 404 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 THPOP40225 353 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 STARD3Q14849 445 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 STRIP1Q5VSL9 837 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 POTEAQ6S8J7 498 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 TBC1D16Q8TBP0 767 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 NUDT12Q9BQG2 462 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 RANBP17Q9H2T7 1088 aaKnown RBP10.56□□□□□ -0.72
CLIP1-202ENST00000358808 PAIP2BQ9ULR5 123 aaKnown RBP10.56□□□□□ -0.72
CLIP1-202ENST00000358808 SNX8Q9Y5X2 465 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 NRKQ7Z2Y5 1582 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 PIPSLA2A3N6 862 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 IFRD1O00458 451 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 ENDOD1O94919 500 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 PRCPP42785 496 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 PRKAA1Q13131 559 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 DHX34Q14147 1143 aaKnown RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 GNASQ5JWF2 1037 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 OLFML2BQ68BL8 750 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 SPATA21Q7Z572 469 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 UBA3Q8TBC4 463 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 GTF3C2Q8WUA4 911 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 TAF1DQ9H5J8 278 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 PVALEFA0A1B0GWK0 134 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 C17orf102A2RUQ5 167 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 TCP11X1B4DZS4 312 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 C19orf81C9J6K1 198 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 KIAA0391O15091 583 aaKnown RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 EGFRP00533 1210 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CETPP11597 493 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 SGSM1Q2NKQ1 1148 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 SRLQ86TD4 932 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 EPHX4Q8IUS5 362 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 TBC1D10CQ8IV04 446 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 RTL3Q8N8U3 475 aaKnown RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CYFIP2Q96F07 1278 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CAAP1Q9H8G2 361 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 EVA1BQ9NVM1 165 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CCL15-CCL14A0A0B4J2E2 113 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CAPN15O75808 1086 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 PTK7Q13308 1070 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 NCOA4Q13772 614 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 TRIM25Q14258 630 aaKnown RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 EPHA7Q15375 998 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CCL15Q16663 113 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 DGKDQ16760 1214 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 RFFLQ8WZ73 363 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 RPRD1AQ96P16 312 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 PRRG3Q9BZD7 231 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CIPCQ9C0C6 399 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 HDHD2Q9H0R4 259 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 USP32Q8NFA0 1604 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CD163L1Q9NR16 1453 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CFAP73A6NFT4 308 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 SMIM22K7EJ46 135 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 KRT33AO76009 404 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 OR6A2O95222 327 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 IL18RAPO95256 599 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 ALDH9A1P49189 494 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 RCN1Q15293 331 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 MYO1HQ8N1T3 1032 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 NACC2Q96BF6 587 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 NT5C1AQ9BXI3 368 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 NPHP3-ACAD11A0A0J9YXS1 232 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CCDC189A1A4V9 331 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 MAGEB2O15479 319 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 URODP06132 367 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CKMP06732 381 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 DSG3P32926 999 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 TALDO1P37837 337 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 SGCGQ13326 291 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 EZH2Q15910 746 aaKnown RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 TTC39BQ5VTQ0 682 aaPredicted RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 TYW3Q6IPR3 259 aaKnown RBP10.55□□□□□ -0.72
CLIP1-202ENST00000358808 SMIM5Q71RC9 77 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 BNIPLQ7Z465 357 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 SCAIQ8N9R8 606 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 RNFT2Q96EX2 444 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 SPATA2Q9UM82 520 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 CHMP2BQ9UQN3 213 aa10.55□□□□□ -0.72
CLIP1-202ENST00000358808 USP27XA6NNY8 438 aa10.54□□□□□ -0.72
CLIP1-202ENST00000358808 KLHL2O95198 593 aa10.54□□□□□ -0.72
CLIP1-202ENST00000358808 FAM200BP0CF97 657 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms