RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 VAV3Q9UKW4 847 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 NCAPD2Q15021 1401 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 ADAMTS12P58397 1594 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 TIMM44O43615 452 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.281e-7■■■■■ 165.2
SMC4-202ENST00000357388 GH1P01241 217 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 ACADSBP45954 432 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 TRAF3Q13114 568 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 Q4G0T1 1027 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 LRRC6Q86X45 466 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 ATXN2LQ8WWM7 1075 aaKnown RBP13.3□□□□□ -0.28
SMC4-202ENST00000357388 LPAR1Q92633 364 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 PACSIN1Q9BY11 444 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 FHOD1Q9Y613 1164 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 RAD54BQ9Y620 910 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 SOAT1P35610 550 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 FMO5P49326 533 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 MAPK7Q13164 816 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 TOP3AQ13472 1001 aaPredicted RBP13.3□□□□□ -0.28
SMC4-202ENST00000357388 DDR2Q16832 855 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 QRICH1Q2TAL8 776 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 TIMM50Q3ZCQ8 353 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 GLB1LQ6UWU2 654 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 SGMS1Q86VZ5 419 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 IRX2Q9BZI1 471 aaPredicted RBP13.3□□□□□ -0.28
SMC4-202ENST00000357388 REXO4Q9GZR2 422 aaKnown RBP13.3□□□□□ -0.28
SMC4-202ENST00000357388 STN1Q9H668 368 aaKnown RBP13.3□□□□□ -0.28
SMC4-202ENST00000357388 IL6P05231 212 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 SERPIND1P05546 499 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 XKR3Q5GH77 459 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 ATAD3BQ5T9A4 648 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 MZT2BQ6NZ67 158 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 CASKIN2Q8WXE0 1202 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 TINF2Q9BSI4 451 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 MKNK1Q9BUB5 465 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 TMEM117Q9H0C3 514 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 USP6P35125 1406 aa13.3□□□□□ -0.28
SMC4-202ENST00000357388 MCAMP43121 646 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 PRKAA2P54646 552 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 RASA2Q15283 850 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 SEL1L3Q68CR1 1132 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 RNF149Q8NC42 400 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 MDM1Q8TC05 714 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 RORBQ92753 470 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 NAT9Q9BTE0 207 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 BDH2Q9BUT1 245 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 TEX13BQ9BXU2 312 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 MRPL39Q9NYK5 338 aaKnown RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 HEATR9A2RTY3 570 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 EEF2KO00418 725 aaKnown RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 PDGFRAP16234 1089 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 COMTP21964 271 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 SLC20A2Q08357 652 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 XRCC4Q13426 336 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 NOA1Q8NC60 698 aaKnown RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 ZNF333Q96JL9 665 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 FAM111AQ96PZ2 611 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 PEG3Q9GZU2 1588 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 NEDD4P46934 1319 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 FAM20BO75063 409 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 LCP1P13796 627 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 AKAP5P24588 427 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 PPP3CCP48454 512 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 DPP10Q8N608 796 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 TMEM120AQ9BXJ8 343 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 CATSPERBQ9H7T0 1116 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 LATS2Q9NRM7 1088 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 DGAT1O75907 488 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 PSMB9P28065 219 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 PCSK1P29120 753 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 PRDX5P30044 214 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 ITGA9Q13797 1035 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 RGS21Q2M5E4 152 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 TRPC4APQ8TEL6 797 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 KCNB2Q92953 911 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 BTBD10Q9BSF8 475 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 RSL24D1Q9UHA3 163 aaKnown RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 CNOT7Q9UIV1 285 aaKnown RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
SMC4-202ENST00000357388 REREQ9P2R6 1566 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 MROH7Q68CQ1 1323 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 CTTNBP2Q8WZ74 1663 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 ZBTB39O15060 712 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 ALDH1A2O94788 518 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 FXR1P51114 621 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMC4-202ENST00000357388 FCHO2Q0JRZ9 810 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 NFYCQ13952 458 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 KRT77Q7Z794 578 aa13.29□□□□□ -0.28
SMC4-202ENST00000357388 TBC1D10CQ8IV04 446 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms