RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 PRPF4O43172 522 aaKnown RBP eCLIP13.17□□□□□ -0.32e-7■■■■■ 99.5
SYNCRIP-201ENST00000355238 SOAT2O75908 522 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 RPA1P27694 616 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 SERPINH1P50454 418 aaKnown RBP13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 Q3C1V9 767 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 ARMC3Q5W041 872 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 BTBD8Q5XKL5 378 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 VPS33AQ96AX1 596 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 MCRS1Q96EZ8 462 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 APOL4Q9BPW4 351 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 STARD13Q9Y3M8 1113 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 ADGRA2Q96PE1 1338 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 PNPLA6Q8IY17 1366 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 OVOS2A0A0G2JMS6 1433 aa13.17□□□□□ -0.3
SYNCRIP-201ENST00000355238 E9PBE3 544 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 SNX3O60493 162 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 KLHL41O60662 606 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 MTM1Q13496 603 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 NDUFA5Q16718 116 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 CLEC4MQ9H2X3 399 aaPredicted RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 EIF3LQ9Y262 564 aaKnown RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 METP08581 1390 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 TAF4O00268 1085 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 RGS4P49798 205 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 NCKAP1LP55160 1127 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 NFYCQ13952 458 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 NCF4Q15080 339 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 FUT11Q495W5 492 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 RNF219Q5W0B1 726 aaPredicted RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 EFHBQ8N7U6 833 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 BDH2Q9BUT1 245 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 ATXN10Q9UBB4 475 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 SHOC2Q9UQ13 582 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 H0YC42 278 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 PDE9AO76083 593 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 EIF2S1P05198 315 aaKnown RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 CPA3P15088 417 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 SMTNL2Q2TAL5 461 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 TFB1MQ8WVM0 346 aaKnown RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 MOCS2O96007 188 aaPredicted RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 ITGB3BPQ13352 177 aaPredicted RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 PKN2Q16513 984 aaKnown RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 TSEN2Q8NCE0 465 aaKnown RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 EXD1Q8NHP7 514 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 GCNAQ96QF7 691 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 ISCA1Q9BUE6 129 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 FAM49AQ9H0Q0 323 aaPredicted RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 THAP1Q9NVV9 213 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 PKP3Q9Y446 797 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 SDR42E2A6NKP2 422 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 CBX6O95503 412 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 ALADP13716 330 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 PSMB9P28065 219 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 GPAT2Q6NUI2 795 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 UNC45BQ8IWX7 931 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 MREGQ8N565 214 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 HDAC7Q8WUI4 952 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 GRIP2Q9C0E4 1043 aa13.16□□□□□ -0.3
SYNCRIP-201ENST00000355238 PTPN7P35236 360 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ACADSBP45954 432 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 RBP5P82980 135 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 REXO4Q9GZR2 422 aaKnown RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 TCF7L2Q9NQB0 619 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 CFAP65Q6ZU64 1925 aaKnown RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 KRT6BP04259 564 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ATP6V1B2P21281 511 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 TGM2P21980 687 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 RPL5P46777 297 aaKnown RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 KRT6CP48668 564 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF618Q5T7W0 954 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 RDM1Q8NG50 284 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 APOPT1Q96IL0 206 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF333Q96JL9 665 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 C9orf16Q9BUW7 83 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 RAVER2Q9HCJ3 691 aaKnown RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 TULP2O00295 520 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 FDX1P10109 184 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 IFI35P80217 286 aaPredicted RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 POU4F1Q01851 419 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 CACHD1Q5VU97 1274 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 CREG2Q8IUH2 290 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 FNIP1Q8TF40 1166 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF75CPQ92670 426 aaPredicted RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 RORBQ92753 470 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 EHD4Q9H223 541 aa13.15□□□□□ -0.3
SYNCRIP-201ENST00000355238 RRN3Q9NYV6 651 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms