RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 ZNF449Q6P9G9 518 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 C1orf228Q6PIY5 440 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 CCDC149Q6ZUS6 474 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 ZNF235Q14590 738 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 USP41Q3LFD5 358 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 PABPC1LQ4VXU2 614 aaKnown RBP14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 RABGAP1LQ5R372 815 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 IFNLR1Q8IU57 520 aaPredicted RBP14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 SMC6Q96SB8 1091 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 NXF3Q9H4D5 531 aaKnown RBP14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 CNOT10Q9H9A5 744 aaKnown RBP14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 L2HGDHQ9H9P8 463 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 TRIM10Q9UDY6 481 aa14.3□□□□□ -0.12
CSNK1G3-201ENST00000345990 IQANK1A0A1B0GTG1 560 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 ARL1P40616 181 aaPredicted RBP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 MAP3K7CLP57077 242 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 TFDP3Q5H9I0 405 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 B4GALNT4Q76KP1 1039 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 SLFN11Q7Z7L1 901 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 FIBCD1Q8N539 461 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 ATPAF2Q8N5M1 289 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 RXFP2Q8WXD0 754 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 IFT43Q96FT9 208 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 SERPINB11Q96P15 392 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 LACRTQ9GZZ8 138 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 EBAG9O00559 213 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 GLI1P08151 1106 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 PDE1BQ01064 536 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 GPS1Q13098 491 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 ZC3H3Q8IXZ2 948 aaKnown RBP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 SLC2A14Q8TDB8 520 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 PFDN4Q9NQP4 134 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 NFU1Q9UMS0 254 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 NCANO14594 1321 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 SIGLEC16A6NMB1 481 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 DNM1LO00429 736 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 CYP1A2P05177 515 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 ZNF865P0CJ78 1059 aaPredicted RBP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 NPR3P17342 541 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 PPM1FP49593 454 aaPredicted RBP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 AP1B1Q10567 949 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 LLGL1Q15334 1064 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 C6orf163Q5TEZ5 329 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 ZNF557Q8N988 423 aaPredicted RBP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 B3GALNT2Q8NCR0 500 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 CCT6BQ92526 530 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 PLCD4Q9BRC7 762 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 SMYD3Q9H7B4 428 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 RASGRF2O14827 1237 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 KRT37O76014 449 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 OXCT1P55809 520 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 FAM172AQ8WUF8 416 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 MRRFQ96E11 262 aaKnown RBP14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 C16orf70Q9BSU1 422 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 TMEM161AQ9NX61 479 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 PCDHGC5Q9Y5F6 944 aa14.29□□□□□ -0.12
CSNK1G3-201ENST00000345990 CST8O60676 142 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 SPAG6O75602 509 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 YWHAQP27348 245 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 STX2P32856 288 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 CDH8P55286 799 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 TRIP13Q15645 432 aaPredicted RBP14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 WSCD1Q658N2 575 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 CHSY1Q86X52 802 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 CCDC110Q8TBZ0 833 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 HES2Q9Y543 173 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 ARHGAP42A6NI28 874 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 SYN3O14994 580 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 GRAP2O75791 330 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 VIMP08670 466 aaKnown RBP14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 TYMPP19971 482 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 OAS2P29728 719 aaKnown RBP14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 PDCLQ13371 301 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 CST9Q5W186 159 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 IRF2BP2Q7Z5L9 587 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 CCDC97Q96F63 343 aaPredicted RBP14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 TRPC7Q9HCX4 862 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 MRPL17Q9NRX2 175 aaKnown RBP14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 CALCOCO1Q9P1Z2 691 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 TNS1Q9HBL0 1735 aaKnown RBP14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 EXOC1LA0A1B0GW35 172 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 RBAK-RBAKDNI3L0D1 243 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 XYLBO75191 536 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 PFKMP08237 780 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 ARSEP51690 589 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 RNF187Q5TA31 235 aaPredicted RBP14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 IZUMO3Q5VZ72 239 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 PID1Q7Z2X4 250 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 LZTR1Q8N653 840 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 C1orf54Q8WWF1 131 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 VPS39Q96JC1 886 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 PCYT2Q99447 389 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 USP18Q9UMW8 372 aa14.28□□□□□ -0.12
CSNK1G3-201ENST00000345990 ANKRD31Q8N7Z5 1873 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms