RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 SPDYAQ5MJ70 313 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 SH3RF1Q7Z6J0 888 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 ZNF560Q96MR9 790 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 MED15Q96RN5 788 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 PARVBQ9HBI1 364 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 ATAD3AQ9NVI7 634 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 NYAP2Q9P242 653 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 COPG2Q9UBF2 871 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 RBP5P82980 135 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 ZNF235Q14590 738 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 SEC23AQ15436 765 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 C2CD6Q53TS8 623 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 OR6Y1Q8NGX8 325 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 TMEM143Q96AN5 459 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 SDR42E2A6NKP2 422 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 TIMM44O43615 452 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 BNIP3LO60238 219 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 ALADP13716 330 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 NAPEPLDQ6IQ20 393 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 MARK2Q7KZI7 788 aaKnown RBP18.09■□□□□ 0.49
SPAST-202ENST00000345662 USP33Q8TEY7 942 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 RMDN1Q96DB5 314 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 ZFYVE19Q96K21 471 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 IGSF9BQ9UPX0 1349 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 MEI4A8MW99 385 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 MTSS1O43312 755 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 SMNDC1O75940 238 aaKnown RBP eCLIP18.09■□□□□ 0.49
SPAST-202ENST00000345662 NDUFB10O96000 172 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 CHRNB3Q05901 458 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 AUHQ13825 339 aaKnown RBP18.09■□□□□ 0.49
SPAST-202ENST00000345662 TSHZ1Q6ZSZ6 1077 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 HEATR4Q86WZ0 1026 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 SCN4BQ8IWT1 228 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 MAGEC3Q8TD91 643 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 PPP1R2P1Q96PQ5 205 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 GORASP1Q9BQQ3 440 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 THAP1Q9NVV9 213 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
SPAST-202ENST00000345662 PRR23D1E9PI22 279 aaPredicted RBP18.08■□□□□ 0.49
SPAST-202ENST00000345662 PRR23D2P0DMB1 279 aaPredicted RBP18.08■□□□□ 0.49
SPAST-202ENST00000345662 TGM2P21980 687 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 TSPY1Q01534 308 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 TFB1MQ8WVM0 346 aaKnown RBP18.08■□□□□ 0.49
SPAST-202ENST00000345662 NDEL1Q9GZM8 345 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 TMEM245Q9H330 911 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 RPL26L1Q9UNX3 145 aaKnown RBP18.08■□□□□ 0.49
SPAST-202ENST00000345662 ZCCHC11Q5TAX3 1644 aaKnown RBP18.08■□□□□ 0.49
SPAST-202ENST00000345662 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.49
SPAST-202ENST00000345662 SUPT3HB4E1H0 165 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 SHBGP04278 402 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 KIZQ2M2Z5 673 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 ZCCHC7Q8N3Z6 543 aaKnown RBP18.08■□□□□ 0.49
SPAST-202ENST00000345662 ATPAF2Q8N5M1 289 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 GRIP2Q9C0E4 1043 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 TCF7L2Q9NQB0 619 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 ZMYND8Q9ULU4 1186 aaPredicted RBP18.08■□□□□ 0.49
SPAST-202ENST00000345662 PCDHA3Q9Y5H8 950 aa18.08■□□□□ 0.49
SPAST-202ENST00000345662 NPHP4O75161 1426 aaPredicted RBP18.08■□□□□ 0.48
SPAST-202ENST00000345662 FAM205AQ6ZU69 1335 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 FDX1P10109 184 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 CHN2P52757 468 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 LAMC2Q13753 1193 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 CCDC126Q96EE4 140 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 NRDE2Q9H7Z3 1164 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 A1CFQ9NQ94 594 aaKnown RBP18.08■□□□□ 0.48
SPAST-202ENST00000345662 HOXC10Q9NYD6 342 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 PNMA3Q9UL41 463 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 DDX3XO00571 662 aaKnown RBP eCLIP18.08■□□□□ 0.482e-7■■■■□ 20
SPAST-202ENST00000345662 ABLIM1O14639 778 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 BMPR2Q13873 1038 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 RRP1BQ14684 758 aaKnown RBP18.08■□□□□ 0.48
SPAST-202ENST00000345662 CEP78Q5JTW2 689 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 TAF2Q6P1X5 1199 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 TDRD5Q8NAT2 981 aaKnown RBP18.08■□□□□ 0.48
SPAST-202ENST00000345662 DIS3LQ8TF46 1054 aaKnown RBP18.08■□□□□ 0.48
SPAST-202ENST00000345662 USP13Q92995 863 aaPredicted RBP18.08■□□□□ 0.48
SPAST-202ENST00000345662 TRIM45Q9H8W5 580 aaPredicted RBP18.08■□□□□ 0.48
SPAST-202ENST00000345662 TMEM161AQ9NX61 479 aa18.08■□□□□ 0.48
SPAST-202ENST00000345662 SMIM31A0A1B0GVY4 71 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 POLRMTO00411 1230 aaKnown RBP18.07■□□□□ 0.48
SPAST-202ENST00000345662 ZC3H11AO75152 810 aaKnown RBP eCLIP18.07■□□□□ 0.48
SPAST-202ENST00000345662 ENTPD5O75356 428 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 PLA2G4FQ68DD2 849 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 NR1H4Q96RI1 486 aaPredicted RBP18.07■□□□□ 0.48
SPAST-202ENST00000345662 TBX20Q9UMR3 447 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 HEATR9A2RTY3 570 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 APBA3O96018 575 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 ADRA1DP25100 572 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 SOX6P35712 828 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 CSTF3Q12996 717 aaKnown RBP18.07■□□□□ 0.48
SPAST-202ENST00000345662 PTK6Q13882 451 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 GCNAQ96QF7 691 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 CYLDQ9NQC7 956 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 AFF4Q9UHB7 1163 aaKnown RBP18.07■□□□□ 0.48
SPAST-202ENST00000345662 CDV3Q9UKY7 258 aaKnown RBP18.07■□□□□ 0.48
SPAST-202ENST00000345662 SNX9Q9Y5X1 595 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 ACTL7BQ9Y614 415 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 RGS5O15539 181 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 NUDT17P0C025 328 aa18.07■□□□□ 0.48
SPAST-202ENST00000345662 BMP6P22004 513 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms