RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SLC39A10Q9ULF5 831 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 FAM237AA0A1B0GTK4 181 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 MYL2P10916 166 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 GZMAP12544 262 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 PTPN4P29074 926 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 PPARGP37231 505 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SERPINB9P50453 376 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ADARP55265 1226 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SLC34A1Q06495 639 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 LBRQ14739 615 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 TFDP3Q5H9I0 405 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 LRRC74BQ6ZQY2 392 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 OTOP1Q7RTM1 612 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NLRP9Q7RTR0 991 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 IFNEQ86WN2 208 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NRBF2Q96F24 287 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NDNQ99608 321 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 DMAP1Q9NPF5 467 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 PXMP2Q9NR77 195 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 PRMT7Q9NVM4 692 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 DPP3Q9NY33 737 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 TAS2R14Q9NYV8 317 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ERAP1Q9NZ08 941 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NDUFA13Q9P0J0 144 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 LRRC10BA6NIK2 292 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 RNF225M0QZC1 329 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 OGTO15294 1046 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 PROSCO94903 275 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SUPT20HL2P0C7V6 817 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NCAM1P13591 858 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 VCAM1P19320 739 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 AVPR1AP37288 418 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NCALDP61601 193 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SFSWAPQ12872 951 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 RIPK1Q13546 671 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 SPOCD1Q6ZMY3 1216 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 NT5DC3Q86UY8 548 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ZSWIM2Q8NEG5 633 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 KAT5Q92993 513 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 IL1RL2Q9HB29 575 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ARHGEF38Q9NXL2 777 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 ATXN10Q9UBB4 475 aa8.38□□□□□ -1.07
UBE4B-202ENST00000343090 REXO2Q9Y3B8 237 aaKnown RBP8.38□□□□□ -1.07
UBE4B-202ENST00000343090 VTNP04004 478 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 POLBP06746 335 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 FESP07332 822 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 PYGBP11216 843 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 RAB27AP51159 221 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 DLG4P78352 724 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 URGCPQ8TCY9 931 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 SNX19Q92543 992 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 SPATA17Q96L03 361 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 C17orf75Q9HAS0 396 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 RIPK2O43353 540 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 HBP1O60381 514 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 SNX3O60493 162 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 C6orf222P0C671 652 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 RARAP10276 462 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 CYP2C9P11712 490 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 ETFBP38117 255 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 INPP1P49441 399 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 DNAL1Q4LDG9 190 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 PCNX4Q63HM2 1172 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 IQCKQ8N0W5 287 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 MAB21L3Q8N8X9 362 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 WDR60Q8WVS4 1066 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 ATXN2LQ8WWM7 1075 aaKnown RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 CENPTQ96BT3 561 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 PAFAH2Q99487 392 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 CISHQ9NSE2 258 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 NAALADL1Q9UQQ1 740 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 MAGEB2O15479 319 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 HNRNPRO43390 633 aaKnown RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 SPRP35270 261 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 RARRES1P49788 294 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 BMPR2Q13873 1038 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 PDK1Q15118 436 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 OLFML1Q6UWY5 402 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 MTDHQ86UE4 582 aaKnown RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 FBXO16Q8IX29 292 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 CHST13Q8NET6 341 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 RDM1Q8NG50 284 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 CASP10Q92851 521 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 FAXDC2Q96IV6 333 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 CGRRF1Q99675 332 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 PRDM5Q9NQX1 630 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 GRID1Q9ULK0 1009 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 COL5A2P05997 1499 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 TLR2O60603 784 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 ETS2P15036 469 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 CYP2B6P20813 491 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 MLH1P40692 756 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 XRRA1Q6P2D8 792 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 KIAA2013Q8IYS2 634 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 KRT35Q92764 455 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 HAS1Q92839 578 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 C10orf88Q9H8K7 445 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 EML4Q9HC35 981 aaKnown RBP8.37□□□□□ -1.07
UBE4B-202ENST00000343090 BTBD7Q9P203 1132 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms