RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 C15orf59Q2T9L4 293 aaPredicted RBP16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 TTC30AQ86WT1 665 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 BEST2Q8NFU1 509 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 TRIM6Q9C030 488 aaPredicted RBP16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 FAM49BQ9NUQ9 324 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 RECQL4O94761 1208 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 GPD1P21695 349 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 PCK1P35558 622 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 GDF10P55107 478 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 CORO7P57737 925 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 QPCTQ16769 361 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 SOWAHAQ2M3V2 549 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 PKDCCQ504Y2 493 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 CNPY3Q9BT09 278 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 KLK14Q9P0G3 267 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 DNAH12Q6ZR08 3092 aa16.69■□□□□ 0.26
CCDC144A-202ENST00000340621 HCRTO43612 131 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 TCEA3O75764 348 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 PSEN2P49810 448 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 BEX3Q00994 111 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 C9orf57Q5W0N0 161 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 CYP4V2Q6ZWL3 525 aaPredicted RBP16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 SCUBE3Q8IX30 993 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 ATXN2LQ8WWM7 1075 aaKnown RBP16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 CALN1Q9BXU9 219 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 FOXP3Q9BZS1 431 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 PCDH9Q9HC56 1237 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 SAYSD1Q9NPB0 183 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 CNTN3Q9P232 1028 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 GABBR2O75899 941 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 CREB1P16220 341 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 HUNKP57058 714 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 MMRN1Q13201 1228 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 SNX17Q15036 470 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 STILQ15468 1287 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 HP1BP3Q5SSJ5 553 aaPredicted RBP16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 RNASEH2BQ5TBB1 312 aaKnown RBP16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 CYP4F22Q6NT55 531 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 RFX6Q8HWS3 928 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 CYP4X1Q8N118 509 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 LRRC52Q8N7C0 313 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 TTC13Q8NBP0 860 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 OR6B3Q8NGW1 331 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 SLC35F5Q8WV83 523 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 ARHGEF2Q92974 986 aaKnown RBP16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 DPEP3Q9H4B8 488 aa16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 PIN4Q9Y237 131 aaKnown RBP16.68■□□□□ 0.26
CCDC144A-202ENST00000340621 SMIM28A0A1B0GU29 152 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 HAS3O00219 553 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 MYL3P08590 195 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 CYP2B6P20813 491 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 MORF4L2Q15014 288 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 PCBP1Q15365 356 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 CDO1Q16878 200 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 CCDC14Q49A88 953 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 TAOK1Q7L7X3 1001 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 C10orf67Q8IYJ2 551 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 KHSRPQ92945 711 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 CFAP57Q96MR6 1250 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 SLC4A5Q9BY07 1137 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 MIS12Q9H081 205 aa16.67■□□□□ 0.26
CCDC144A-202ENST00000340621 ATP11AP98196 1134 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 FASTKD3Q14CZ7 662 aaKnown RBP16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 CCDC142Q17RM4 750 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 OLFML1Q6UWY5 402 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 TMEM110Q86TL2 294 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 UNC45BQ8IWX7 931 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 USP6NLQ92738 828 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 B3GNT5Q9BYG0 378 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 FRMD8P1Q9BZ68 369 aaPredicted RBP16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 INTS9Q9NV88 658 aaKnown RBP16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 DDX20Q9UHI6 824 aaKnown RBP16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 A8MXQ7 604 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 PIRO00625 290 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 SPTLC1O15269 473 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 ENDOD1O94919 500 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 PDGFRBP09619 1106 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 CDH6P55285 790 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 C7orf31Q8N865 590 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 TBK1Q9UHD2 729 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 UBQLN1Q9UMX0 589 aaKnown RBP16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.66■□□□□ 0.26
CCDC144A-202ENST00000340621 GOLGA8MH3BSY2 632 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 APOC4-APOC2K7ER74 178 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 PAPSS1O43252 624 aaPredicted RBP16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 APOC2P02655 101 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 FGFR1P11362 822 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 DRD4P21917 467 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 LMO2P25791 158 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 AXLP30530 894 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 CPT1AP50416 773 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 SLC6A3Q01959 620 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 UBXN11Q5T124 520 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 ZNF618Q5T7W0 954 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 CEP128Q6ZU80 1094 aa16.65■□□□□ 0.26
CCDC144A-202ENST00000340621 SESTD1Q86VW0 696 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms