RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 GANQ9H2C0 597 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLCS-201ENST00000336648 ZDHHC9Q9Y397 364 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 FLT1P17948 1338 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 TWF1Q12792 350 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 MTA1Q13330 715 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 SNAPC2Q13487 334 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 RSBN1Q5VWQ0 802 aaPredicted RBP13.55□□□□□ -0.24
HLCS-201ENST00000336648 GLMNQ92990 594 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 PPP1R36Q96LQ0 422 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 RARBP10826 455 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 CHRNB3Q05901 458 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 ZRANB3Q5FWF4 1079 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 KDELC2Q7Z4H8 507 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 LRRC6Q86X45 466 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 CHSY1Q86X52 802 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 ZSWIM1Q9BR11 485 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 CAAP1Q9H8G2 361 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 AGPAT5Q9NUQ2 364 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 SLC39A10Q9ULF5 831 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 KLHL20Q9Y2M5 609 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 DAGLAQ9Y4D2 1042 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLCS-201ENST00000336648 PRRG1O14668 218 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 VPS26AO75436 327 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 COX10Q12887 443 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 MTMR2Q13614 643 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 ARMCX6Q7L4S7 300 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 TMCC3Q9ULS5 477 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 TRIM49D1C9J1S8 452 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 ALDH1A2O94788 518 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 SNUPNO95149 360 aaKnown RBP13.55□□□□□ -0.24
HLCS-201ENST00000336648 MYBP10242 640 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 SLC11A2P49281 568 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 STK4Q13043 487 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 ITGB1BP2Q9UKP3 347 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 MCL1Q07820 350 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 ZCWPW2Q504Y3 356 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 TDRD10Q5VZ19 366 aaKnown RBP13.55□□□□□ -0.24
HLCS-201ENST00000336648 PLA2G4FQ68DD2 849 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 DENND1BQ6P3S1 775 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 MOXD1Q6UVY6 613 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 C16orf62Q7Z3J2 963 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 RAET1EQ8TD07 263 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 CAMKK2Q96RR4 588 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 TRIM39Q9HCM9 518 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 SLC40A1Q9NP59 571 aa13.55□□□□□ -0.24
HLCS-201ENST00000336648 POLRMTO00411 1230 aaKnown RBP13.54□□□□□ -0.24
HLCS-201ENST00000336648 EGFRP00533 1210 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 ETFBP38117 255 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 PIGUQ9H490 435 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 SPASTQ9UBP0 616 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 RWDD3Q9Y3V2 267 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 RBP1P09455 135 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 ODC1P11926 461 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 GUCY1A2P33402 732 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 EIF2B2P49770 351 aaKnown RBP13.54□□□□□ -0.24
HLCS-201ENST00000336648 PEX5P50542 639 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 MAPK7Q13164 816 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
HLCS-201ENST00000336648 DCAF6Q58WW2 860 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 OR8H2Q8N162 312 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 ZNF333Q96JL9 665 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 EMILIN2Q9BXX0 1053 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 H7C4K7 107 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 PTPN7P35236 360 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 ALDH1A3P47895 512 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 PUDPQ08623 228 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 KRT73Q86Y46 540 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 STN1Q9H668 368 aaKnown RBP13.54□□□□□ -0.24
HLCS-201ENST00000336648 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 CORO7P57737 925 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 C11orf88Q6PI97 169 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 DENND6AQ8IWF6 608 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 SLC25A41Q8N5S1 370 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 GGT7Q9UJ14 662 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 MAP3K4Q9Y6R4 1608 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 ADGRA2Q96PE1 1338 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 NRKQ7Z2Y5 1582 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 ATP6V1B1P15313 513 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 PCSK7Q16549 785 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 PHKG1Q16816 387 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 RAD9BQ6WBX8 426 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 LRRC8DQ7L1W4 858 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 LRRC49Q8IUZ0 686 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 TPCN2Q8NHX9 752 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 ANKRD49Q8WVL7 239 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 FAM151AQ8WW52 585 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 YIPF2Q9BWQ6 316 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
HLCS-201ENST00000336648 FKBP6O75344 327 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 NPM3O75607 178 aaKnown RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 RXRGP48443 463 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 IKBIPQ70UQ0 350 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ZNF786Q8N393 782 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 VPS33AQ96AX1 596 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 MCRS1Q96EZ8 462 aa13.53□□□□□ -0.24
HLCS-201ENST00000336648 ZNF668Q96K58 619 aaPredicted RBP13.53□□□□□ -0.24
HLCS-201ENST00000336648 LRRC40Q9H9A6 602 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms