RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CNTN2Q02246 1040 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 KLC1Q07866 573 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 WDR72Q3MJ13 1102 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 RBM12BQ8IXT5 1001 aaKnown RBP17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 AGBL3Q8NEM8 1001 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 PRPF31Q8WWY3 499 aaKnown RBP17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 TJP2Q9UDY2 1190 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 THSD7AQ9UPZ6 1657 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 QSER1Q2KHR3 1735 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 KAT6AQ92794 2004 aa17.28■□□□□ 0.36
CDC42EP4-201ENST00000335793 TTLL13PA6NNM8 815 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 RBP3P10745 1247 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 CDH8P55286 799 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 EIF3EP60228 445 aaKnown RBP17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 SP2Q02086 613 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 MCL1Q07820 350 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 RFX8Q6ZV50 586 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 PORCNQ9H237 461 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 DDX56Q9NY93 547 aaKnown RBP17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 GRID1Q9ULK0 1009 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 MCF2LO15068 1137 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 HNRNPRO43390 633 aaKnown RBP17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 LPXNO60711 386 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 DPEP1P16444 411 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 RNASEH2BQ5TBB1 312 aaKnown RBP17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 WDR78Q5VTH9 848 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 PPIL6Q8IXY8 311 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 CFAP36Q96G28 342 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 NIF3L1Q9GZT8 377 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 PCDH9Q9HC56 1237 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 STK32BQ9NY57 414 aa17.27■□□□□ 0.36
CDC42EP4-201ENST00000335793 A0A0B4J269 797 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 ENTPD5O75356 428 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 FNBP1LQ5T0N5 605 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 PPP1R2P3Q6NXS1 205 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 XRRA1Q6P2D8 792 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 AGGF1Q8N302 714 aaeCLIP17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 ZNF280CQ8ND82 737 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 JOSD2Q8TAC2 188 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 TEX13BQ9BXU2 312 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 TRIM55Q9BYV6 548 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 SHOC2Q9UQ13 582 aa17.27■□□□□ 0.35
CDC42EP4-201ENST00000335793 TNNC2P02585 160 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 CD48P09326 243 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 GCAP28676 217 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 CCNFP41002 786 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 CDKN2BP42772 138 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 TMEM132BQ14DG7 1078 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 PCGF5Q86SE9 256 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 LRRC6Q86X45 466 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 SPATA18Q8TC71 538 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 TFAP2BQ92481 460 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 UPF1Q92900 1129 aaKnown RBP eCLIP17.26■□□□□ 0.353e-7■■■■■ 31.4
CDC42EP4-201ENST00000335793 CAMKK2Q96RR4 588 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 METTL5Q9NRN9 209 aaKnown RBP17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 SLC17A7Q9P2U7 560 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 GRAP2O75791 330 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 ZCCHC18P0CG32 403 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 STAT5BP51692 787 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 ZNF252P-AS1Q0IIN9 211 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 DENND1BQ6P3S1 775 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 APBB1IPQ7Z5R6 666 aaPredicted RBP17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 OPTNQ96CV9 577 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 FAM111AQ96PZ2 611 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 MANSC1Q9H8J5 431 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 CYP39A1Q9NYL5 469 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 HEY2Q9UBP5 337 aa17.26■□□□□ 0.35
CDC42EP4-201ENST00000335793 SUPT3HO75486 399 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 KRT7P08729 469 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 GSTT1P30711 240 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 RPL22P35268 128 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 YARSP54577 528 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 RTP1P59025 263 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 MAPK6Q16659 721 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 SGSM1Q2NKQ1 1148 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 MSS51Q4VC12 460 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 C1orf228Q6PIY5 440 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 UNC45BQ8IWX7 931 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 SLC24A2Q9UI40 661 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 POLIQ9UNA4 740 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 HEY1Q9Y5J3 304 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 STBD1O95210 358 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 ARFIP2P53365 341 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 FSTL1Q12841 308 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 KLHL38Q2WGJ6 581 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 FAXCQ5TGI0 409 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 ASRGL1Q7L266 308 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 ZBTB8OSQ8IWT0 167 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 PPM1NQ8N819 430 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 DRG1Q9Y295 367 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 TCRBV7S3A2A0A539 114 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 ASS1P00966 412 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 GPX6P59796 221 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 USP46P62068 366 aa17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 MRPS35P82673 323 aaKnown RBP17.25■□□□□ 0.35
CDC42EP4-201ENST00000335793 ACVR2BQ13705 512 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms