RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 RUBCNQ92622 972 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 CYFIP2Q96F07 1278 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 RTP3Q9BQQ7 232 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 DUSP16Q9BY84 665 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 ZBP1Q9H171 429 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 CSNK1G1Q9HCP0 422 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 MRPL17Q9NRX2 175 aaKnown RBP10.03□□□□□ -0.8
C11orf54-201ENST00000331239 EHD2Q9NZN4 543 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 DPP7Q9UHL4 492 aa10.03□□□□□ -0.8
C11orf54-201ENST00000331239 ANKRD62A6NC57 917 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 FSCN2O14926 492 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 ITGB1P05556 798 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 TKTP29401 623 aaKnown RBP10.02□□□□□ -0.8
C11orf54-201ENST00000331239 RAP1GAPP47736 663 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 TAP1Q03518 808 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 GFPT1Q06210 699 aaPredicted RBP10.02□□□□□ -0.8
C11orf54-201ENST00000331239 BST2Q10589 180 aaKnown RBP10.02□□□□□ -0.8
C11orf54-201ENST00000331239 RAB33AQ14088 237 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 CTXN3Q4LDR2 81 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 KIAA1841Q6NSI8 718 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 ALKBH5Q6P6C2 394 aaKnown RBP10.02□□□□□ -0.8
C11orf54-201ENST00000331239 ARCQ7LC44 396 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 MMGT1Q8N4V1 131 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 COG1Q8WTW3 980 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 SMARCD1Q96GM5 515 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 OSBPL9Q96SU4 736 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 AVENQ9NQS1 362 aaPredicted RBP10.02□□□□□ -0.8
C11orf54-201ENST00000331239 HPCAL4Q9UM19 191 aa10.02□□□□□ -0.8
C11orf54-201ENST00000331239 MYH10P35580 1976 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 GBF1Q92538 1859 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 H3BNC9 293 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 DDX3XO00571 662 aaKnown RBP eCLIP10.02□□□□□ -0.819e-8■■■□□ 15.2
C11orf54-201ENST00000331239 XPO1O14980 1071 aaKnown RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 TRIM66O15016 1216 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 POU2F2P09086 479 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 CD19P15391 556 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 IBSPP21815 317 aaPredicted RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 NDUFV1P49821 464 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 HADHBP55084 474 aaKnown RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 HNRNPH2P55795 449 aaKnown RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 MLLT1Q03111 559 aaPredicted RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 PSMD5Q16401 504 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 IFI16Q16666 785 aaKnown RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 LRIT3Q3SXY7 679 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 ELMSAN1Q6PJG2 1045 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 ACOT1Q86TX2 421 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 RNF10Q8N5U6 811 aaKnown RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 C1orf131Q8NDD1 294 aaKnown RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 C8orf48Q96LL4 319 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 TWNKQ96RR1 684 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 TRIM62Q9BVG3 475 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 EMILIN2Q9BXX0 1053 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 LMCD1Q9NZU5 365 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 AFF4Q9UHB7 1163 aaKnown RBP10.02□□□□□ -0.81
C11orf54-201ENST00000331239 PCDHB5Q9Y5E4 795 aa10.02□□□□□ -0.81
C11orf54-201ENST00000331239 SART1O43290 800 aaKnown RBP10.01□□□□□ -0.81
C11orf54-201ENST00000331239 LPXNO60711 386 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 ZMYND10O75800 440 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 ABLIM3O94929 683 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 FBXO21O94952 628 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 PAPLNO95428 1278 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 H2AFZP0C0S5 128 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 TMEM253P0C7T8 217 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 LMO2P25791 158 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 TUFMP49411 452 aaKnown RBP10.01□□□□□ -0.81
C11orf54-201ENST00000331239 NOMO3P69849 1222 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 PLD1Q13393 1074 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 ZNF268Q14587 947 aaPredicted RBP10.01□□□□□ -0.81
C11orf54-201ENST00000331239 CCDC181Q5TID7 509 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 H2AFVQ71UI9 128 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 GSPT2Q8IYD1 628 aaKnown RBP10.01□□□□□ -0.81
C11orf54-201ENST00000331239 FBXO22Q8NEZ5 403 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 OLIG1Q8TAK6 271 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 SLC35F5Q8WV83 523 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 SPATA17Q96L03 361 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 CRTAC1Q9NQ79 661 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 ASNSD1Q9NWL6 643 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 ADAMTS1Q9UHI8 967 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 PATJQ8NI35 1801 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 FAM200BP0CF97 657 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 MYBL2P10244 700 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 CTNNB1P35222 781 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 GPD2P43304 727 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 NSFP46459 744 aaKnown RBP10.01□□□□□ -0.81
C11orf54-201ENST00000331239 RPL10AP62906 217 aaKnown RBP10.01□□□□□ -0.81
C11orf54-201ENST00000331239 ARID5AQ03989 594 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 ZSCAN26Q16670 478 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 LIN9Q5TKA1 542 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 FAM117BQ6P1L5 589 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 CCNI2Q6ZMN8 369 aaPredicted RBP10.01□□□□□ -0.81
C11orf54-201ENST00000331239 BEND5Q7L4P6 421 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 TMEM110Q86TL2 294 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 KLHL23Q8NBE8 558 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 SPATA4Q8NEY3 305 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 SPPL3Q8TCT6 385 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 BCL7CQ8WUZ0 217 aaPredicted RBP10.01□□□□□ -0.81
C11orf54-201ENST00000331239 TFAP2BQ92481 460 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 ZBTB9Q96C00 473 aa10.01□□□□□ -0.81
C11orf54-201ENST00000331239 CDCA3Q99618 268 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms