RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 BMPR2Q13873 1038 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 CCDC142Q17RM4 750 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 RINLQ6ZS11 566 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 WDR60Q8WVS4 1066 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 TSSK1BQ9BXA7 367 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 TMEM120AQ9BXJ8 343 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 SLC13A1Q9BZW2 595 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 UGT1A7Q9HAW7 530 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 UGT1A10Q9HAW8 530 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 UGT1A8Q9HAW9 530 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 GPATCH2LQ9NWQ4 482 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 TROVE2P10155 538 aaKnown RBP eCLIP20.78■□□□□ 0.92
CRLF3-201ENST00000324238 KDELR1P24390 212 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 PTK7Q13308 1070 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 DALRD3Q5D0E6 543 aaKnown RBP20.78■□□□□ 0.92
CRLF3-201ENST00000324238 NCAPG2Q86XI2 1143 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 UBA3Q8TBC4 463 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 SPATA18Q8TC71 538 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 SLC24A2Q9UI40 661 aa20.78■□□□□ 0.92
CRLF3-201ENST00000324238 DPPA5A6NC42 116 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 CYB561D2O14569 222 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 B4GALT5O43286 388 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 PGK2P07205 417 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 ARFIP2P53365 341 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 GHRHRQ02643 423 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 SLC25A11Q02978 314 aaKnown RBP20.77■□□□□ 0.92
CRLF3-201ENST00000324238 PPP1R15BQ5SWA1 713 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 BANPQ8N9N5 519 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 UCMAQ8WVF2 138 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 TWNKQ96RR1 684 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 STYXL1Q9Y6J8 313 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 EME2A4GXA9 379 aaPredicted RBP20.77■□□□□ 0.92
CRLF3-201ENST00000324238 PTPN4P29074 926 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 MCL1Q07820 350 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 PIGHQ14442 188 aaPredicted RBP20.77■□□□□ 0.92
CRLF3-201ENST00000324238 RCN1Q15293 331 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 CCDC6Q16204 474 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 ZNF699Q32M78 642 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 PDIK1LQ8N165 341 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 PPM1NQ8N819 430 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 REPS2Q8NFH8 660 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 TRPM4Q8TD43 1214 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 MZB1Q8WU39 189 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 NLRP4Q96MN2 994 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 DHX33Q9H6R0 707 aaKnown RBP20.77■□□□□ 0.92
CRLF3-201ENST00000324238 ACSS3Q9H6R3 686 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 NR2E3Q9Y5X4 410 aa20.77■□□□□ 0.92
CRLF3-201ENST00000324238 TCRBV9S1A1TA0A576 114 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 SPDYE5A6NIY4 337 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 C2CD2LO14523 706 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 HAUS5O94927 633 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 TREML2Q5T2D2 321 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 ADGRD1Q6QNK2 874 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 ADGRA2Q96PE1 1338 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 FOXP3Q9BZS1 431 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 AFG3L2Q9Y4W6 797 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 CCDC189A1A4V9 331 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 SPATA31C2B4DYI2 1134 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 MIPP30301 263 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 ARL2P36404 184 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 BLMHQ13867 455 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 STXBP2Q15833 593 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 C15orf59Q2T9L4 293 aaPredicted RBP20.76■□□□□ 0.91
CRLF3-201ENST00000324238 SLFN12LQ6IEE8 588 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 DRICH1Q6PGQ1 229 aaPredicted RBP20.76■□□□□ 0.91
CRLF3-201ENST00000324238 DARS2Q6PI48 645 aaKnown RBP20.76■□□□□ 0.91
CRLF3-201ENST00000324238 RNF149Q8NC42 400 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 PIWIL1Q96J94 861 aaKnown RBP20.76■□□□□ 0.91
CRLF3-201ENST00000324238 NIF3L1Q9GZT8 377 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 CNTN6Q9UQ52 1028 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 IKBKGQ9Y6K9 419 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 GYG2O15488 501 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 ZWINTO95229 277 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 ERBB2P04626 1255 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 LINGO3P0C6S8 592 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 MYL2P10916 166 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 PHBP35232 272 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 NAMPTP43490 491 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 IGBP1P78318 339 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 MUM1Q2TAK8 710 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 SLC45A4Q5BKX6 768 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 ACSBG2Q5FVE4 666 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 RDM1Q8NG50 284 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 CLPTM1LQ96KA5 538 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 TRIM55Q9BYV6 548 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 KCNK13Q9HB14 408 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 SENP1Q9P0U3 644 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 HEY1Q9Y5J3 304 aa20.76■□□□□ 0.91
CRLF3-201ENST00000324238 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.76■□□□□ 0.91
CRLF3-201ENST00000324238 SPDYE16A6NNV3 312 aaPredicted RBP20.75■□□□□ 0.91
CRLF3-201ENST00000324238 CXorf49A8MYA2 514 aaPredicted RBP20.75■□□□□ 0.91
CRLF3-201ENST00000324238 ATP5HO75947 161 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 DPYSL3Q14195 570 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 C4orf50Q6ZRC1 276 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 RGS9BPQ6ZS82 235 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 VPS52Q8N1B4 723 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 NETO2Q8NC67 525 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 NRG4Q8WWG1 115 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 INPP5DQ92835 1189 aa20.75■□□□□ 0.91
CRLF3-201ENST00000324238 PCYT2Q99447 389 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms