RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SYCP2LQ5T4T6 812 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 IGDCC3Q8IVU1 814 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 BSNDQ8WZ55 320 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 IDI2Q9BXS1 227 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 WWP1Q9H0M0 922 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 ZNF395Q9H8N7 513 aaPredicted RBP18.68■□□□□ 0.58
PRKCB-202ENST00000321728 HOMER2Q9NSB8 354 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 CNTN3Q9P232 1028 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 TCRBV9S1A1TA0A576 114 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 ARHGAP42A6NI28 874 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 E7ESA3 106 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 OGDHQ02218 1023 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 SMTNL2Q2TAL5 461 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 LRRC38Q5VT99 294 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 TDRD10Q5VZ19 366 aaKnown RBP18.67■□□□□ 0.58
PRKCB-202ENST00000321728 CDHR3Q6ZTQ4 885 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 LDHDQ86WU2 507 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 GSTCDQ8NEC7 633 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 GLIS2Q9BZE0 524 aaPredicted RBP18.67■□□□□ 0.58
PRKCB-202ENST00000321728 AGO4Q9HCK5 861 aaKnown RBP18.67■□□□□ 0.58
PRKCB-202ENST00000321728 DNAJB4Q9UDY4 337 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 QSER1Q2KHR3 1735 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 MEI4A8MW99 385 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 CST8O60676 142 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 HSF5Q4G112 596 aaPredicted RBP18.67■□□□□ 0.58
PRKCB-202ENST00000321728 C15orf39Q6ZRI6 1047 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 ACAD11Q709F0 780 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 OR6Y1Q8NGX8 325 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 PYDC1Q8WXC3 89 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 ZWILCHQ9H900 591 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 DDX56Q9NY93 547 aaKnown RBP18.67■□□□□ 0.58
PRKCB-202ENST00000321728 LYPLA2O95372 231 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 IL1BP01584 269 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 MMP8P22894 467 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 MED21Q13503 144 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 TKFCQ3LXA3 575 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 CTAGE3PQ8IX95 158 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 SLC44A1Q8WWI5 657 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 GPAMQ9HCL2 828 aa18.67■□□□□ 0.58
PRKCB-202ENST00000321728 PRR5-ARHGAP8B1AHC4 643 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 TRIM49D1C9J1S8 452 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 KBTBD13C9JR72 458 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 KLF11O14901 512 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 FKBP6O75344 327 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 FAM155BO75949 473 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 HARSP12081 509 aaKnown RBP18.66■□□□□ 0.58
PRKCB-202ENST00000321728 ARHGAP8P85298 464 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 LSAMPQ13449 338 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 MTMR1Q13613 665 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 UBAP2LQ14157 1087 aaKnown RBP18.66■□□□□ 0.58
PRKCB-202ENST00000321728 ZACNQ401N2 412 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 TMCO4Q5TGY1 634 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 NME8Q8N427 588 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 FAM71DQ8N9W8 422 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 CHURC1Q8WUH1 139 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 E2F7Q96AV8 911 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 PRMT6Q96LA8 375 aaPredicted RBP18.66■□□□□ 0.58
PRKCB-202ENST00000321728 HAPLN3Q96S86 360 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 SLC13A1Q9BZW2 595 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 SMYD3Q9H7B4 428 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 APOBEC3GQ9HC16 384 aaKnown RBP18.66■□□□□ 0.58
PRKCB-202ENST00000321728 STK32BQ9NY57 414 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 ATXN10Q9UBB4 475 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 A6NJR5 290 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 BUD23O43709 281 aaKnown RBP18.66■□□□□ 0.58
PRKCB-202ENST00000321728 ASPHQ12797 758 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 DGKZQ13574 1117 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 CHI3L2Q15782 390 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 KCNT1Q5JUK3 1230 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 ATG16L1Q676U5 607 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 SH2D5Q6ZV89 423 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 UNC45BQ8IWX7 931 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 C4orf19Q8IY42 314 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 COL20A1Q9P218 1284 aa18.66■□□□□ 0.58
PRKCB-202ENST00000321728 PTPN7P35236 360 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 HIC1Q14526 733 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 LPCAT4Q643R3 524 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 PDSS2Q86YH6 399 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 SHKBP1Q8TBC3 707 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 NAT14Q8WUY8 206 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 C7orf26Q96N11 449 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 FAM210AQ96ND0 272 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 S100A14Q9HCY8 104 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 G3BP2Q9UN86 482 aaKnown RBP18.65■□□□□ 0.58
PRKCB-202ENST00000321728 SCN9AQ15858 1988 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 SPATA31D3P0C874 917 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 CCNFP41002 786 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 ACOT2P49753 483 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 NRLP54845 237 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 WNT7BP56706 349 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 MTMR2Q13614 643 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 SPATA31D4Q6ZUB0 917 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 DHDDSQ86SQ9 333 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 CRLF3Q8IUI8 442 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 TRIM42Q8IWZ5 723 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 PPM1NQ8N819 430 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 ZNF606Q8WXB4 792 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 CFAP36Q96G28 342 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 AGBL1Q96MI9 1066 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms