RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TC2NQ8N9U0 490 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 QKIQ96PU8 341 aaKnown RBP eCLIP17.47■□□□□ 0.393e-7■■■■□ 19.4
SMCHD1-201ENST00000320876 MMP19Q99542 508 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 YIPF2Q9BWQ6 316 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 COMMD8Q9NX08 183 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 KCNT1Q5JUK3 1230 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 DGAT1O75907 488 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 FMR1Q06787 632 aaKnown RBP eCLIP17.47■□□□□ 0.392e-7■■■■■ 62.5
SMCHD1-201ENST00000320876 KCNMA1Q12791 1236 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 BNIPLQ7Z465 357 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 RMND5BQ96G75 393 aaPredicted RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 PTPN4P29074 926 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 FLT3P36888 993 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 ZNF544Q6NX49 715 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 EPS8L3Q8TE67 593 aaKnown RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 DCP1AQ9NPI6 582 aaPredicted RBP17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 IGSF9BQ9UPX0 1349 aa17.47■□□□□ 0.39
SMCHD1-201ENST00000320876 RAD23AP54725 363 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 ITGA1P56199 1179 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 TTLL9Q3SXZ7 439 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 EFHC1Q5JVL4 640 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 SH3BP5LQ7L8J4 393 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 CCNJLQ8IV13 435 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 LRRC34Q8IZ02 419 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 NOA1Q8NC60 698 aaKnown RBP17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 KIFC1Q9BW19 673 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 TMEM253P0C7T8 217 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 CRKP46108 304 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 ZBTB49Q6ZSB9 765 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 CENPTQ96BT3 561 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 C1orf50Q9BV19 199 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 NT5C1AQ9BXI3 368 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 GPR63Q9BZJ6 419 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 KLHL18O94889 574 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 ST8SIA6P61647 398 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 SMAD5Q99717 465 aaKnown RBP17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 ZBTB1Q9Y2K1 713 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 KDM6BO15054 1643 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 A2ML1A8K2U0 1454 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 P4HA2O15460 535 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 TPST1O60507 370 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 REEP2Q9BRK0 252 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 SLC38A7Q9NVC3 462 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 AFDNP55196 1824 aaKnown RBP17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 C2orf81A6NN90 581 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 E9PBE3 544 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 TDP2O95551 362 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 ASMTLO95671 621 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 FDX1P10109 184 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 GPD1P21695 349 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 ARL4DP49703 201 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 DENND1BQ6P3S1 775 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 HMG20AQ9NP66 347 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 INTS13Q9NVM9 706 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 LINC00854A0A1B0GVQ3 168 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 CD4P01730 458 aa17.46■□□□□ 0.39
SMCHD1-201ENST00000320876 FAM25AB3EWG3 89 aa17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM25CB3EWG5 89 aa17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM25GB3EWG6 89 aa17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 ZRANB3Q5FWF4 1079 aa17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 IL31Q6EBC2 164 aa17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 NYAP1Q6ZVC0 841 aa17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 MTDHQ86UE4 582 aaKnown RBP17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 TDRD5Q8NAT2 981 aaKnown RBP17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 RNFT2Q96EX2 444 aa17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 CD209Q9NNX6 404 aa17.46■□□□□ 0.38
SMCHD1-201ENST00000320876 FOXN1O15353 648 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.45■□□□□ 0.383e-6■□□□□ 9.2
SMCHD1-201ENST00000320876 SLC10A4Q96EP9 437 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 ACAD9Q9H845 621 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 IPPQ9Y573 584 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 EIF2B5Q13144 721 aaKnown RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 RNF149Q8NC42 400 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 KCNB2Q92953 911 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 PPP2R3CQ969Q6 453 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 RAVER2Q9HCJ3 691 aaKnown RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 RGS18Q9NS28 235 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 RWDD3Q9Y3V2 267 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 ATP9AO75110 1047 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 ITGAXP20702 1163 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 DCTN2Q13561 401 aaKnown RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 CASKIN2Q8WXE0 1202 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 PEX1O43933 1283 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 CYP2D6P10635 497 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 DCAF6Q58WW2 860 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 KYQ8NBH2 561 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 RDM1Q8NG50 284 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 WDR36Q8NI36 951 aaKnown RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 ZNF669Q96BR6 464 aaPredicted RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 MMADHCQ9H3L0 296 aaPredicted RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 RERGLQ9H628 205 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 C1orf232A0A0U1RR37 186 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 PRKCBP05771 671 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 S100A9P06702 114 aaKnown RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 ZNF335Q9H4Z2 1342 aaPredicted RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 ZNF682O95780 498 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 GUCA1AP43080 201 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms