RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ALKBH4Q9NXW9 302 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 SHOC2Q9UQ13 582 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 CAMSAP1Q5T5Y3 1602 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 ABCA8O94911 1581 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 PLEKP08567 350 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 NPTX2P47972 431 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 HPCAP84074 193 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 RALGDSQ12967 914 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 EFHC1Q5JVL4 640 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 RAB23Q9ULC3 237 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 SMIM22K7EJ46 135 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 IRF6O14896 467 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 ZNF284Q2VY69 593 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 LRRC23Q53EV4 343 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 SLC16A10Q8TF71 515 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 THG1LQ9NWX6 298 aaKnown RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 ADGBQ8N7X0 1667 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 PTGER2P43116 358 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 SCNN1GP51170 649 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 CDC42EP1Q00587 391 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 POU4F1Q01851 419 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 PGM5Q15124 567 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 SETD3Q86TU7 594 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 FEZF2Q8TBJ5 459 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 MRPL17Q9NRX2 175 aaKnown RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 MBD5Q9P267 1494 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 TISP43B9A030 160 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 PDXKO00764 312 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 LMNAP02545 664 aaKnown RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 DSG3P32926 999 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 SLC47A2Q86VL8 602 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 SPG21Q9NZD8 308 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 TRMT6Q9UJA5 497 aaKnown RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 PADI4Q9UM07 663 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 PHLPP2Q6ZVD8 1323 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 LINC00854A0A1B0GVQ3 168 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 ENO2P09104 434 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 AKR1A1P14550 325 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 SHROOM1Q2M3G4 852 aaPredicted RBP8.1□□□□□ -1.11
SCN9A-201ENST00000303354 CLEC4FQ8N1N0 589 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 ABCC3O15438 1527 aa8.1□□□□□ -1.11
SCN9A-201ENST00000303354 ANGPT2O15123 496 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 AKAP10O43572 662 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 RPS7P62081 194 aaKnown RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 SBK1Q52WX2 424 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 FBXO41Q8TF61 875 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 WNK4Q96J92 1243 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 GAD1Q99259 594 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.112e-10■■■■□ 20.4
SCN9A-201ENST00000303354 RASSF9O75901 435 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 CXCL14O95715 111 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 OVOS1Q6IE37 1185 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 TMEM199Q8N511 208 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 SH2D3CQ8N5H7 860 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 DNAJC16Q9Y2G8 782 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 CDY2AQ9Y6F7 541 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 CDK12Q9NYV4 1490 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 KDM4FA0A1W2PPD8 638 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 SUPT7LO94864 414 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 MYL2P10916 166 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 ESRRGP62508 458 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 HERC6Q8IVU3 1022 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 ZBTB10Q96DT7 871 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 TMEM8AQ9HCN3 771 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 CIDEBQ9UHD4 219 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 HNF4AP41235 474 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 OVGP1Q12889 678 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 CUL2Q13617 745 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 CES5AQ6NT32 575 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 SCUBE3Q8IX30 993 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 SYTL5Q8TDW5 730 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 PDGFCQ9NRA1 345 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 ZMYM5Q9UJ78 669 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 NCKAP1Q9Y2A7 1128 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 SNX5Q9Y5X3 404 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 C2orf81A6NN90 581 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 ERI2A8K979 691 aaKnown RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 TPST1O60507 370 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 HAUS5O94927 633 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 OR1E1P30953 314 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 HIST2H2ACQ16777 129 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 TREML2Q5T2D2 321 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 HIST2H2AA3Q6FI13 130 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 TMED8Q6PL24 325 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 GUF1Q8N442 669 aaKnown RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 CYGBQ8WWM9 190 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 SERAC1Q96JX3 654 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 USE1Q9NZ43 259 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 VANGL2Q9ULK5 521 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 RABGGTBP53611 331 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 PDIA6Q15084 440 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 COMMD2Q86X83 199 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 ACOX2Q99424 681 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 GAS2L1Q99501 681 aaPredicted RBP8.09□□□□□ -1.11
SCN9A-201ENST00000303354 OSBPL10Q9BXB5 764 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 TRPC4Q9UBN4 977 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 TRIM33Q9UPN9 1127 aa8.09□□□□□ -1.11
SCN9A-201ENST00000303354 LACTBL1A8MY62 500 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms