RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 CD52P31358 61 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 LBX1P52954 281 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 DRG2P55039 364 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 TFAMQ00059 246 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 GCNT1Q02742 428 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 CNGA2Q16280 664 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 DUOXA2Q1HG44 320 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 RNF43Q68DV7 783 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 SLFN11Q7Z7L1 901 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 RTN4RL1Q86UN2 441 aaPredicted RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 SLC47A2Q86VL8 602 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 RBM12BQ8IXT5 1001 aaKnown RBP7.01□□□□□ -1.29
TMC1-201ENST00000297784 PPM1KQ8N3J5 372 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 FBF1Q8TES7 1133 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 SNX27Q96L92 541 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 FAM167BQ9BTA0 163 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ASB7Q9H672 318 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 LRRC4CQ9HCJ2 640 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ERVK-5Q9HDB9 667 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ADAMTS1Q9UHI8 967 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 ARL2BPQ9Y2Y0 163 aa7.01□□□□□ -1.29
TMC1-201ENST00000297784 TDRD15B5MCY1 1934 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 A8MUI8 341 aa7□□□□□ -1.29
TMC1-201ENST00000297784 ZC3H11AO75152 810 aaKnown RBP eCLIP7□□□□□ -1.29
TMC1-201ENST00000297784 IL18RAPO95256 599 aa7□□□□□ -1.29
TMC1-201ENST00000297784 GSTA2P09210 222 aa7□□□□□ -1.29
TMC1-201ENST00000297784 ANXA13P27216 316 aa7□□□□□ -1.29
TMC1-201ENST00000297784 ASPAP45381 313 aa7□□□□□ -1.29
TMC1-201ENST00000297784 KLC1Q07866 573 aa7□□□□□ -1.29
TMC1-201ENST00000297784 CETN1Q12798 172 aa7□□□□□ -1.29
TMC1-201ENST00000297784 DCAF4L1Q3SXM0 396 aa7□□□□□ -1.29
TMC1-201ENST00000297784 TDRD12Q587J7 1177 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 PPP1R15BQ5SWA1 713 aa7□□□□□ -1.29
TMC1-201ENST00000297784 MFSD5Q6N075 450 aa7□□□□□ -1.29
TMC1-201ENST00000297784 IRGCQ6NXR0 463 aa7□□□□□ -1.29
TMC1-201ENST00000297784 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7□□□□□ -1.29
TMC1-201ENST00000297784 UBR7Q8N806 425 aa7□□□□□ -1.29
TMC1-201ENST00000297784 LNX1Q8TBB1 728 aaPredicted RBP7□□□□□ -1.29
TMC1-201ENST00000297784 DIS3LQ8TF46 1054 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 DDX1Q92499 740 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 PRMT1Q99873 361 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 SELENOSQ9BQE4 189 aa7□□□□□ -1.29
TMC1-201ENST00000297784 ZDHHC18Q9NUE0 388 aa7□□□□□ -1.29
TMC1-201ENST00000297784 CNTN3Q9P232 1028 aa7□□□□□ -1.29
TMC1-201ENST00000297784 STXBP5LQ9Y2K9 1186 aa7□□□□□ -1.29
TMC1-201ENST00000297784 C2CD2Q9Y426 696 aa7□□□□□ -1.29
TMC1-201ENST00000297784 TANC1Q9C0D5 1861 aa7□□□□□ -1.29
TMC1-201ENST00000297784 PPEF2O14830 753 aa7□□□□□ -1.29
TMC1-201ENST00000297784 RGS16O15492 202 aaPredicted RBP7□□□□□ -1.29
TMC1-201ENST00000297784 CEP104O60308 925 aa7□□□□□ -1.29
TMC1-201ENST00000297784 RECQL4O94761 1208 aa7□□□□□ -1.29
TMC1-201ENST00000297784 SGPL1O95470 568 aa7□□□□□ -1.29
TMC1-201ENST00000297784 COL6A1P12109 1028 aa7□□□□□ -1.29
TMC1-201ENST00000297784 ATF7P17544 494 aaPredicted RBP7□□□□□ -1.29
TMC1-201ENST00000297784 CHRNB2P17787 502 aa7□□□□□ -1.29
TMC1-201ENST00000297784 RFX1P22670 979 aa7□□□□□ -1.29
TMC1-201ENST00000297784 SP100P23497 879 aaPredicted RBP7□□□□□ -1.29
TMC1-201ENST00000297784 PIK3CAP42336 1068 aa7□□□□□ -1.29
TMC1-201ENST00000297784 MAGEA8P43361 318 aa7□□□□□ -1.29
TMC1-201ENST00000297784 PEX5P50542 639 aa7□□□□□ -1.29
TMC1-201ENST00000297784 SOX4Q06945 474 aaPredicted RBP7□□□□□ -1.29
TMC1-201ENST00000297784 DSC3Q14574 896 aa7□□□□□ -1.29
TMC1-201ENST00000297784 TCTN1Q2MV58 587 aa7□□□□□ -1.29
TMC1-201ENST00000297784 STK32AQ8WU08 396 aa7□□□□□ -1.29
TMC1-201ENST00000297784 SLC20A1Q8WUM9 679 aa7□□□□□ -1.29
TMC1-201ENST00000297784 C18orf25Q96B23 403 aaPredicted RBP7□□□□□ -1.29
TMC1-201ENST00000297784 RBM41Q96IZ5 413 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 TMEM237Q96Q45 408 aa7□□□□□ -1.29
TMC1-201ENST00000297784 SYT15Q9BQS2 421 aa7□□□□□ -1.29
TMC1-201ENST00000297784 ADPGKQ9BRR6 497 aa7□□□□□ -1.29
TMC1-201ENST00000297784 DDX47Q9H0S4 455 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 VCXQ9H320 206 aa7□□□□□ -1.29
TMC1-201ENST00000297784 KLK14Q9P0G3 267 aa7□□□□□ -1.29
TMC1-201ENST00000297784 PCDH10Q9P2E7 1040 aa7□□□□□ -1.29
TMC1-201ENST00000297784 NOCTQ9UK39 431 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 PACSIN2Q9UNF0 486 aaPredicted RBP7□□□□□ -1.29
TMC1-201ENST00000297784 CNTN6Q9UQ52 1028 aa7□□□□□ -1.29
TMC1-201ENST00000297784 PCDHB2Q9Y5E7 798 aa7□□□□□ -1.29
TMC1-201ENST00000297784 KIAA0100Q14667 2235 aaKnown RBP7□□□□□ -1.29
TMC1-201ENST00000297784 A0A0A6YYK5 440 aaPredicted RBP6.99□□□□□ -1.29
TMC1-201ENST00000297784 SMIM28A0A1B0GU29 152 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 FAM187AA6NFU0 413 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 KRIT1O00522 736 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 DDX3XO00571 662 aaKnown RBP eCLIP6.99□□□□□ -1.29
TMC1-201ENST00000297784 PTGESO14684 152 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 CYP26A1O43174 497 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 PEX11AO75192 247 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 UNC5CO95185 931 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 ITGB3P05106 788 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 TPBGLP0DKB5 382 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 STAT1P42224 750 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 AP3M2P53677 418 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 PMS2P54278 862 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 NOP14P78316 857 aaKnown RBP6.99□□□□□ -1.29
TMC1-201ENST00000297784 KLHL30Q0D2K2 578 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 NFX1Q12986 1120 aaKnown RBP6.99□□□□□ -1.29
TMC1-201ENST00000297784 GLRA4Q5JXX5 417 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 DENND2CQ68D51 928 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 DUPD1Q68J44 220 aa6.99□□□□□ -1.29
TMC1-201ENST00000297784 OR52E8Q6IFG1 317 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms