RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CCDC170Q8IYT3 715 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 KREMEN2Q8NCW0 462 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 C1orf131Q8NDD1 294 aaKnown RBP18.18■□□□□ 0.5
SKP2-201ENST00000274254 SEPT5Q99719 369 aaPredicted RBP18.18■□□□□ 0.5
SKP2-201ENST00000274254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.18■□□□□ 0.5
SKP2-201ENST00000274254 UBXN6Q9BZV1 441 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 DEF6Q9H4E7 631 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 PNPLA8Q9NP80 782 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 SEPT11Q9NVA2 429 aaKnown RBP18.18■□□□□ 0.5
SKP2-201ENST00000274254 MTCH2Q9Y6C9 303 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 SZT2Q5T011 3432 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 PRRG1O14668 218 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 SOAT2O75908 522 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 GZMAP12544 262 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 EPCAMP16422 314 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 ATF6P18850 670 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 RPL34P49207 117 aaKnown RBP18.18■□□□□ 0.5
SKP2-201ENST00000274254 CCZ1BP86790 482 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 CCZ1P86791 482 aaPredicted RBP18.18■□□□□ 0.5
SKP2-201ENST00000274254 CENPCQ03188 943 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 DDR2Q16832 855 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 TCEAL5Q5H9L2 206 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 NAA35Q5VZE5 725 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 PMF1Q6P1K2 205 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 PIGZQ86VD9 579 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 HDAC7Q8WUI4 952 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 CEP295NLQ96MC4 621 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 FAM161BQ96MY7 647 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 PLEKHA4Q9H4M7 779 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 YIPF1Q9Y548 306 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 INSL5Q9Y5Q6 135 aa18.18■□□□□ 0.5
SKP2-201ENST00000274254 PATJQ8NI35 1801 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 AKR1B10O60218 316 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 GPR15P49685 360 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 RPL10AP62906 217 aaKnown RBP18.17■□□□□ 0.5
SKP2-201ENST00000274254 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
SKP2-201ENST00000274254 HYAL1Q12794 435 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 PDCLQ13371 301 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 RAD9BQ6WBX8 426 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 CCDC149Q6ZUS6 474 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 SCN4BQ8IWT1 228 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 SLC7A14Q8TBB6 771 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 CPA5Q8WXQ8 436 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 KCTD13Q8WZ19 329 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 SPATA17Q96L03 361 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 HSFY1Q96LI6 401 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 SLC4A5Q9BY07 1137 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 MAN1C1Q9NR34 630 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 TAS2R14Q9NYV8 317 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 NAGPAQ9UK23 515 aa18.17■□□□□ 0.5
SKP2-201ENST00000274254 TNFRSF10BO14763 440 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 GABBR2O75899 941 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 LCA5LO95447 670 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 C8AP07357 584 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 GTF2F1P35269 517 aaKnown RBP eCLIP18.16■□□□□ 0.5
SKP2-201ENST00000274254 MTF1Q14872 753 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 PTPN20Q4JDL3 420 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 ACAD10Q6JQN1 1059 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 ALKBH5Q6P6C2 394 aaKnown RBP18.16■□□□□ 0.5
SKP2-201ENST00000274254 PHF13Q86YI8 300 aaPredicted RBP18.16■□□□□ 0.5
SKP2-201ENST00000274254 VN1R2Q8NFZ6 395 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 CPXM1Q96SM3 734 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 CYLDQ9NQC7 956 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 SPTLC3Q9NUV7 552 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 DPP7Q9UHL4 492 aa18.16■□□□□ 0.5
SKP2-201ENST00000274254 GREB1Q4ZG55 1949 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 ZNF263O14978 683 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 MMP8P22894 467 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 CYLC1P35663 651 aaPredicted RBP18.15■□□□□ 0.5
SKP2-201ENST00000274254 NSFP46459 744 aaKnown RBP18.15■□□□□ 0.5
SKP2-201ENST00000274254 RAB41Q5JT25 222 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 LIN9Q5TKA1 542 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 SDHAF4Q5VUM1 108 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 PPP1R2P3Q6NXS1 205 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 TMEM184AQ6ZMB5 413 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 GPRIN1Q7Z2K8 1008 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 TMEM110Q86TL2 294 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 PPP1R13BQ96KQ4 1090 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 NOX5Q96PH1 765 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 GAS2L1Q99501 681 aaPredicted RBP18.15■□□□□ 0.5
SKP2-201ENST00000274254 ISCUQ9H1K1 167 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
SKP2-201ENST00000274254 EPN1Q9Y6I3 576 aaPredicted RBP18.15■□□□□ 0.5
SKP2-201ENST00000274254 EIF3CLB5ME19 914 aaKnown RBP18.14■□□□□ 0.49
SKP2-201ENST00000274254 ARHGAP6O43182 974 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 RTN2O75298 545 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 ZMYND10O75800 440 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 NDUFA10O95299 355 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 HOXA9P31269 272 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 ALDH1A3P47895 512 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 RGS7P49802 495 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 SLC5A3P53794 718 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.49
SKP2-201ENST00000274254 TWF1Q12792 350 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 PLD1Q13393 1074 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 Q7L0L9 218 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 MON1BQ7L1V2 547 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 NUP93Q8N1F7 819 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 EFHBQ8N7U6 833 aa18.14■□□□□ 0.49
SKP2-201ENST00000274254 EIF3CQ99613 913 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms