RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 PTK7Q13308 1070 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 BBS12Q6ZW61 710 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 APBB1IPQ7Z5R6 666 aaPredicted RBP23.17■■□□□ 1.3
CDR2-201ENST00000268383 RNF149Q8NC42 400 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 SPATA18Q8TC71 538 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 TRIM56Q9BRZ2 755 aaKnown RBP23.17■■□□□ 1.3
CDR2-201ENST00000268383 DHRS4Q9BTZ2 278 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 TEX13BQ9BXU2 312 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 XYLT2Q9H1B5 865 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 ARMCX1Q9P291 453 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 E5RJQ4 531 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 UBA1P22314 1058 aaKnown RBP23.17■■□□□ 1.3
CDR2-201ENST00000268383 EIF4BP23588 611 aaKnown RBP23.17■■□□□ 1.3
CDR2-201ENST00000268383 PTPN4P29074 926 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 MIPP30301 263 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 SGSM1Q2NKQ1 1148 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 PDIK1LQ8N165 341 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 NIPA2Q8N8Q9 360 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 TSSK1BQ9BXA7 367 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 TCRBV9S1A1TA0A576 114 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 GRAP2O75791 330 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 MT-ND3P03897 115 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 HOXC6P09630 235 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 TROVE2P10155 538 aaKnown RBP eCLIP23.17■■□□□ 1.3
CDR2-201ENST00000268383 CPA2P48052 419 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 DPYSL3Q14195 570 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 STXBP2Q15833 593 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 CDHR3Q6ZTQ4 885 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 TRAPPC12Q8WVT3 735 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 PEBP4Q96S96 227 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 MECRQ9BV79 373 aa23.17■■□□□ 1.3
CDR2-201ENST00000268383 ZNF395Q9H8N7 513 aaPredicted RBP23.17■■□□□ 1.3
CDR2-201ENST00000268383 SMNDC1O75940 238 aaKnown RBP eCLIP23.16■■□□□ 1.3
CDR2-201ENST00000268383 PSEN1P49768 467 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 CDO1Q16878 200 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 CFAP36Q96G28 342 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 SDCBP2Q9H190 292 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 KCNK13Q9HB14 408 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 SIGLEC16A6NMB1 481 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 TOM1L1O75674 476 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 PEX19P40855 299 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 C1orf228Q6PIY5 440 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 PCGF5Q86SE9 256 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 PIWIL1Q96J94 861 aaKnown RBP23.16■■□□□ 1.3
CDR2-201ENST00000268383 ACO2Q99798 780 aaKnown RBP23.16■■□□□ 1.3
CDR2-201ENST00000268383 TMEM120AQ9BXJ8 343 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 LCTP09848 1927 aa23.16■■□□□ 1.3
CDR2-201ENST00000268383 ZBTB16Q05516 673 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 KLHL38Q2WGJ6 581 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 PHIPQ8WWQ0 1821 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 STAT5BP51692 787 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 CCNG1P51959 295 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 EN1Q05925 392 aaPredicted RBP23.15■■□□□ 1.3
CDR2-201ENST00000268383 TNFAIP1Q13829 316 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 EEF1DP3Q658K8 133 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 DARS2Q6PI48 645 aaKnown RBP23.15■■□□□ 1.3
CDR2-201ENST00000268383 XYLT1Q86Y38 959 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 SCYL3Q8IZE3 742 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 CCDC33Q8N5R6 958 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 UBA3Q8TBC4 463 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 PPP1R16BQ96T49 567 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 R3HDMLQ9H3Y0 253 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 TMEM134Q9H6X4 195 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 SMYD3Q9H7B4 428 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 PCDHGC3Q9UN70 934 aa23.15■■□□□ 1.3
CDR2-201ENST00000268383 FAM237BA0A1B0GVD1 139 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 E7ESA3 106 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 HAUS5O94927 633 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 PRKCBP05771 671 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 PCK1P35558 622 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 ARFIP2P53365 341 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 TARBP2Q15633 366 aaKnown RBP23.14■■□□□ 1.3
CDR2-201ENST00000268383 HADHQ16836 314 aaKnown RBP23.14■■□□□ 1.3
CDR2-201ENST00000268383 LY6KQ17RY6 165 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 C15orf59Q2T9L4 293 aaPredicted RBP23.14■■□□□ 1.3
CDR2-201ENST00000268383 MDH1BQ5I0G3 518 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 RINLQ6ZS11 566 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 POLNQ7Z5Q5 900 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 CTAGE3PQ8IX95 158 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 OSBPL1AQ9BXW6 950 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 MRPL4Q9BYD3 311 aaKnown RBP23.14■■□□□ 1.3
CDR2-201ENST00000268383 NIFKQ9BYG3 293 aaKnown RBP23.14■■□□□ 1.3
CDR2-201ENST00000268383 TRIM55Q9BYV6 548 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 BATF3Q9NR55 127 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 PICK1Q9NRD5 415 aa23.14■■□□□ 1.3
CDR2-201ENST00000268383 KRT7P08729 469 aa23.14■■□□□ 1.29
CDR2-201ENST00000268383 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.29
CDR2-201ENST00000268383 CDH5P33151 784 aaPredicted RBP23.14■■□□□ 1.29
CDR2-201ENST00000268383 TCF7P36402 384 aaPredicted RBP23.14■■□□□ 1.29
CDR2-201ENST00000268383 CCNHP51946 323 aaPredicted RBP23.14■■□□□ 1.29
CDR2-201ENST00000268383 TMEM132AQ24JP5 1023 aa23.14■■□□□ 1.29
CDR2-201ENST00000268383 CAPRIN2Q6IMN6 1127 aaKnown RBP23.14■■□□□ 1.29
CDR2-201ENST00000268383 PPP1R2P3Q6NXS1 205 aa23.14■■□□□ 1.29
CDR2-201ENST00000268383 MICALL2Q8IY33 904 aa23.14■■□□□ 1.29
CDR2-201ENST00000268383 DTX3LQ8TDB6 740 aa23.14■■□□□ 1.29
CDR2-201ENST00000268383 GPATCH2LQ9NWQ4 482 aa23.14■■□□□ 1.29
CDR2-201ENST00000268383 CPSF3Q9UKF6 684 aaKnown RBP23.14■■□□□ 1.29
CDR2-201ENST00000268383 SIP14410 1827 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 CCDC195A0A1B0GUA6 201 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 OGTO15294 1046 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms