RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CCNYL1Q8N7R7 359 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 PDCD6IPQ8WUM4 868 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 NGRNQ9NPE2 291 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 NCKIPSDQ9NZQ3 722 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 PRPF19Q9UMS4 504 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 LPIN1Q14693 890 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 PLEKHA7Q6IQ23 1121 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 WDR12Q9GZL7 423 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 C2orf40Q9H1Z8 148 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 AIM2O14862 343 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 MAFGO15525 162 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 CCNG1P51959 295 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 PEX3P56589 373 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 PPP4CP60510 307 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 C6orf89Q6UWU4 347 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 ERO1BQ86YB8 467 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 A0A087X0B3 334 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 GRAPQ13588 217 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 DPYSQ14117 519 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 ACCSLQ4AC99 568 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 GRAPLQ8TC17 118 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 COA1Q9GZY4 146 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 VAV1P15498 845 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 SPATA16Q9BXB7 569 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 TEX12Q9BXU0 123 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 KIF17Q9P2E2 1029 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 HEY1Q9Y5J3 304 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 SDR42E2A6NKP2 422 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 DNALI1O14645 258 aaPredicted RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 CSTF3Q12996 717 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 ACAP1Q15027 740 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 ZBTB49Q6ZSB9 765 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 TRIM74Q86UV6 250 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 TRIM73Q86UV7 250 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 HADHBP55084 474 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 TMEM126BQ8IUX1 230 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 SLC9A9Q8IVB4 645 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 PDPRQ8NCN5 879 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 ITGAVP06756 1048 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 ME2P23368 584 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 PRKAA1Q13131 559 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 OLFM1Q99784 485 aa12.12□□□□□ -0.47
DNMT3A-201ENST00000264709 TCRBV5S4A2TA0A5A2 114 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 MAGEA8P43361 318 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 PDK3Q15120 406 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 FAM9CQ8IZT9 166 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 SH3RF3Q8TEJ3 882 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 PRCCQ92733 491 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 FSD1LQ9BXM9 530 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ASNA1O43681 348 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 CYTH3O43739 400 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 RARAP10276 462 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 TBCCD1Q9NVR7 557 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 TM7SF2O76062 418 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 RAG1P15918 1043 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 HGSNATQ68CP4 663 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ELMSAN1Q6PJG2 1045 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ZNF34Q8IZ26 560 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 OSGEPQ9NPF4 335 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 KCNN4O15554 427 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 FBXO36Q8NEA4 188 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 FLAD1Q8NFF5 587 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 MCEEQ96PE7 176 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 SAGE2PA6NJ88 616 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 PRAMEP78395 509 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 KLRC3Q07444 240 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 FAM102AQ5T9C2 384 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 CHSY1Q86X52 802 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 PNPT1Q8TCS8 783 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 TCP10LQ8TDR4 215 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 RSPH1Q8WYR4 309 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 PIGBQ92521 554 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 CAAP1Q9H8G2 361 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ENOPH1Q9UHY7 261 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ASAP1Q9ULH1 1129 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 DNAJB2P25686 324 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 PRDX5P30044 214 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 NCKAP1LP55160 1127 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 GTF2IP78347 998 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 TAF2Q6P1X5 1199 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 CPXCR1Q8N123 301 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 PRELID2Q8N945 189 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 FNIP1Q8TF40 1166 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 HSPH1Q92598 858 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 APPL1Q9UKG1 709 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 C15orf38-AP3S2A0A0A6YYH1 394 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 VWA5AO00534 786 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 ENO3P13929 434 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 SOX6P35712 828 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 CASP2P42575 452 aa12.11□□□□□ -0.47
DNMT3A-201ENST00000264709 NAA20P61599 178 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms