RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 PTGER2P43116 358 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TAF5Q15542 800 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 WLSQ5T9L3 541 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TRIM50Q86XT4 487 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 ST13P4Q8IZP2 240 aaPredicted RBP14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 RNF217Q8TC41 542 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 ATP2A3Q93084 1043 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 RBM41Q96IZ5 413 aaKnown RBP14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TRIM56Q9BRZ2 755 aaKnown RBP14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 NMRK1Q9NWW6 199 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 NHSQ6T4R5 1651 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 FCHO1O14526 889 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 DGAT1O75907 488 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 KRT3P12035 628 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 FSTL1Q12841 308 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 SPOCD1Q6ZMY3 1216 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TEX9Q8N6V9 391 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 MCPH1Q8NEM0 835 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TMC2Q8TDI7 906 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TRIM11Q96F44 468 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 MFSD14AQ96MC6 490 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 CYP39A1Q9NYL5 469 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 CLIC5Q9NZA1 410 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 LIASO43766 372 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 VNN1O95497 513 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 STAMBPO95630 424 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 NELFEP18615 380 aaKnown RBP14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 SFNP31947 248 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 OGDHQ02218 1023 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 GCNT1Q02742 428 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 MON1BQ7L1V2 547 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TAS1R3Q7RTX0 852 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TRABD2AQ86V40 505 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 CEP120Q8N960 986 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 TMEM35BQ8NCS4 154 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 IP6K2Q9UHH9 426 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 GRID1Q9ULK0 1009 aa14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 APOBEC2Q9Y235 224 aaKnown RBP14.62□□□□□ -0.07
TUBGCP3-201ENST00000261965 ADCY3O60266 1144 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 PRAMEP78395 509 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 CRADDP78560 199 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 CNTN2Q02246 1040 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 CAV1Q03135 178 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 TMEM63BQ5T3F8 832 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 NBPF12Q5TAG4 269 aaPredicted RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 NPNTQ6UXI9 565 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 PGBD4Q96DM1 585 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 VCX3AQ9NNX9 186 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 ANKEF1Q9NU02 776 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 ZC3H7BQ9UGR2 993 aaKnown RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 APPL1Q9UKG1 709 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 SCINQ9Y6U3 715 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 TCRBV7S3A2A0A539 114 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 DNALI1O14645 258 aaPredicted RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 XPO1O14980 1071 aaKnown RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 MTA2O94776 668 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 ZWINTO95229 277 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 F7P08709 466 aaPredicted RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 PTPN4P29074 926 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 GEMIN4P57678 1058 aaKnown RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 AP2B1P63010 937 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 SLC25A3Q00325 362 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 FAAP100Q0VG06 881 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 NR1H3Q13133 447 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 ZACNQ401N2 412 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 CES3Q6UWW8 571 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 WDR75Q8IWA0 830 aaKnown RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 TMEM109Q9BVC6 243 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 POLIQ9UNA4 740 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 SMG5Q9UPR3 1016 aaKnown RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 FNDC3AQ9Y2H6 1198 aaKnown RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 COMMD10Q9Y6G5 202 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 PRPSAP2O60256 369 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 MT-CO1P00395 513 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 MUTP22033 750 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 RFC1P35251 1148 aaPredicted RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 ELK3P41970 407 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 CENPCQ03188 943 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 FOXD4Q12950 439 aaPredicted RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 LRRC74BQ6ZQY2 392 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 C12orf50Q8NA57 414 aaPredicted RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 SLITRK1Q96PX8 696 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 WRNIP1Q96S55 665 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 SLC38A10Q9HBR0 1119 aa14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 A1CFQ9NQ94 594 aaKnown RBP14.61□□□□□ -0.07
TUBGCP3-201ENST00000261965 ENO3P13929 434 aaPredicted RBP14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 KCNA4P22459 653 aa14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 RPL10AP62906 217 aaKnown RBP14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 ACAP1Q15027 740 aa14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 C12orf56Q8IXR9 622 aa14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 KCTD17Q8N5Z5 321 aa14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 JOSD2Q8TAC2 188 aa14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 CYB561D2O14569 222 aa14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 WDR46O15213 610 aaKnown RBP14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 ZNF200P98182 395 aaPredicted RBP14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 USP4Q13107 963 aa14.6□□□□□ -0.07
TUBGCP3-201ENST00000261965 MED21Q13503 144 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms