RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 SHBGP04278 402 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 RAD23BP54727 409 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 CDH8P55286 799 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 MAGOHP61326 146 aaKnown RBP12□□□□□ -0.49
CLUHP3-201ENST00000254109 RBP5P82980 135 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 BYSLQ13895 437 aaKnown RBP12□□□□□ -0.49
CLUHP3-201ENST00000254109 DSC3Q14574 896 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 DCAF4L1Q3SXM0 396 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 PPP1R15BQ5SWA1 713 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 CYP4A22Q5TCH4 519 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 FOXR1Q6PIV2 292 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 GSTA5Q7RTV2 222 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 RTN4RL1Q86UN2 441 aaPredicted RBP12□□□□□ -0.49
CLUHP3-201ENST00000254109 NT5DC4Q86YG4 428 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 NIPA2Q8N8Q9 360 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 DBF4BQ8NFT6 615 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 CCHCR1Q8TD31 782 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 PGM2Q96G03 612 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 TMEM176AQ96HP8 235 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 HPDLQ96IR7 371 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 SLITRK1Q96PX8 696 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 ADAM2Q99965 735 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 HERPUD2Q9BSE4 406 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 TRAIPQ9BWF2 469 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 TRIM6Q9C030 488 aaPredicted RBP12□□□□□ -0.49
CLUHP3-201ENST00000254109 EPN3Q9H201 632 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 RNF39Q9H2S5 420 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 EPB41L4BQ9H329 900 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 SEMA4AQ9H3S1 761 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 VRTNQ9H8Y1 702 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 CNOT10Q9H9A5 744 aaKnown RBP12□□□□□ -0.49
CLUHP3-201ENST00000254109 RNF19AQ9NV58 838 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 SNTG2Q9NY99 539 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 ANAPC5Q9UJX4 755 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 ITGA11Q9UKX5 1188 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 R3HDM2Q9Y2K5 976 aaKnown RBP12□□□□□ -0.49
CLUHP3-201ENST00000254109 SQORQ9Y6N5 450 aa12□□□□□ -0.49
CLUHP3-201ENST00000254109 TLDC2A0PJX2 215 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 SIGLEC16A6NMB1 481 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 SRRM3A6NNA2 597 aaPredicted RBP11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 MEIS3P2A8K0S8 358 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 F8VP50 259 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 GOLGA8SH3BPF8 625 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 EBAG9O00559 213 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 NDUFAB1O14561 156 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 RIPK2O43353 540 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 KRT3P12035 628 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 AKAP5P24588 427 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 PSMA2P25787 234 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 PSMC1P62191 440 aaKnown RBP11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 TRIP13Q15645 432 aaPredicted RBP11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 SLC10A6Q3KNW5 377 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 KAZNQ674X7 775 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 CEP128Q6ZU80 1094 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 TTC39CQ8N584 583 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 SMG8Q8ND04 991 aaKnown RBP11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 TMEM109Q9BVC6 243 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 FAM124BQ9H5Z6 455 aaPredicted RBP11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 CHST12Q9NRB3 414 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 AGAP1Q9UPQ3 857 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 C2CD2Q9Y426 696 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 IPPQ9Y573 584 aa11.99□□□□□ -0.49
CLUHP3-201ENST00000254109 PI4K2BG5E9Z4 385 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 RGS16O15492 202 aaPredicted RBP11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 CILPO75339 1184 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 ATF7P17544 494 aaPredicted RBP11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 GRM5P41594 1212 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 CCT5P48643 541 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 ITGA8P53708 1063 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 ZNF252P-AS1Q0IIN9 211 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 HADHQ16836 314 aaKnown RBP11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 PLEKHG4Q58EX7 1191 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 SPOCD1Q6ZMY3 1216 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 TMEM130Q8N3G9 435 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 LINC01599Q8WXQ3 324 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 TLCD1Q96CP7 247 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 VWCEQ96DN2 955 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 HEXIM2Q96MH2 286 aaKnown RBP11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 FAM107BQ9H098 131 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 SDCBP2Q9H190 292 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 SMYD3Q9H7B4 428 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 KLHL11Q9NVR0 708 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 DPP3Q9NY33 737 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 KLK14Q9P0G3 267 aa11.98□□□□□ -0.49
CLUHP3-201ENST00000254109 KIAA0355O15063 1070 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 AGTP01019 485 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 TIMP1P01033 207 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 KRT7P08729 469 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 VDRP11473 427 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 RAG1P15918 1043 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 PTPN7P35236 360 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 OGDHQ02218 1023 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 ZNF268Q14587 947 aaPredicted RBP11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 PTPN20Q4JDL3 420 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 ATP13A4Q4VNC1 1196 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 TFDP3Q5H9I0 405 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 RHBDF2Q6PJF5 856 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 MFSD7Q6UXD7 560 aa11.97□□□□□ -0.49
CLUHP3-201ENST00000254109 B4GALNT4Q76KP1 1039 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms