RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CALN1Q9BXU9 219 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 PLXNB2O15031 1838 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 APOC4-APOC2K7ER74 178 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 APOC2P02655 101 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 GSTA1P08263 222 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 INCA1Q0VD86 236 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 NR1H3Q13133 447 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 MMRN1Q13201 1228 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 MTM1Q13496 603 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 CYB5D1Q6P9G0 228 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 SPATA21Q7Z572 469 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 SGSM3Q96HU1 749 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 C16orf70Q9BSU1 422 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 CXCL16Q9H2A7 254 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 TRABDQ9H4I3 376 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 DPP3Q9NY33 737 aa20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 BARX2Q9UMQ3 279 aaPredicted RBP20.47■□□□□ 0.87
CDC42EP1-201ENST00000249014 NDC80O14777 642 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 TSPAN1O60635 241 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 TMEM63AO94886 807 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 SUN1O94901 812 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 ASMTLO95671 621 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 P4HA1P13674 534 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 SSTR1P30872 391 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 ZNF143P52747 638 aaPredicted RBP20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 EIF3EP60228 445 aaKnown RBP20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 ACAP1Q15027 740 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 ZNF792Q3KQV3 632 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 MTHFD1LQ6UB35 978 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 C12orf29Q8N999 325 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 FAM71DQ8N9W8 422 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 PPTC7Q8NI37 304 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 DENND1AQ8TEH3 1009 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 NLRP7Q8WX94 980 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 PRKAG3Q9UGI9 489 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 SCN1AP35498 2009 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 VGLL3A8MV65 326 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 E5RJQ4 531 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 UBOX5O94941 541 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 PFKMP08237 780 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 KRT15P19012 456 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 ADCYAP1R1P41586 468 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 EFTUD2Q15029 972 aaKnown RBP eCLIP20.46■□□□□ 0.872e-6■■■□□ 18.8
CDC42EP1-201ENST00000249014 C15orf59Q2T9L4 293 aaPredicted RBP20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 NPNTQ6UXI9 565 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 C4orf33Q8N1A6 199 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 PAIP2Q9BPZ3 127 aaKnown RBP20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 UBN1Q9NPG3 1134 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 ASNSD1Q9NWL6 643 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 RABGEF1Q9UJ41 708 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 TSPAN16Q9UKR8 245 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 ITGA11Q9UKX5 1188 aa20.46■□□□□ 0.87
CDC42EP1-201ENST00000249014 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 A0A1W2PPM1 405 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 C2CD4BA6NLJ0 364 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 PRPF4O43172 522 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 PIAS1O75925 651 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 ADORA2AP29274 412 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 PCK1P35558 622 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 IL9RQ01113 521 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 MKRN3Q13064 507 aaKnown RBP20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 FAM183BPQ6ZVS7 135 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 ACAP3Q96P50 834 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 GRID1Q9ULK0 1009 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 C2CD2Q9Y426 696 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 GRAP2O75791 330 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 ENDOD1O94919 500 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 RBP3P10745 1247 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 GPD1P21695 349 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 ARL4CP56559 192 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 RBP5P82980 135 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 EFHC2Q5JST6 749 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 FAM182AQ5T1J6 154 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 LCLAT1Q6UWP7 414 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 SPATA18Q8TC71 538 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 PYROXD1Q8WU10 500 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 RXFP2Q8WXD0 754 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 RSAD1Q9HA92 442 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 ZMYND8Q9ULU4 1186 aaPredicted RBP20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 ARL2BPQ9Y2Y0 163 aa20.45■□□□□ 0.86
CDC42EP1-201ENST00000249014 A0A1B0GUA9 196 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 RPA3P35244 121 aaPredicted RBP20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 MTFR1Q15390 333 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 MARCH8Q5T0T0 291 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 OR6B2Q6IFH4 312 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 CNPY3Q9BT09 278 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 KATNBL1Q9H079 304 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 SLC24A2Q9UI40 661 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 KAT6AQ92794 2004 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 COL1A2P08123 1366 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 E7ESA3 106 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 H3BRB1 525 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 MCF2LO15068 1137 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 PDGFRAP16234 1089 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 MNAT1P51948 309 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 CDH6P55285 790 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 MGAT5Q09328 741 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 RASA2Q15283 850 aa20.44■□□□□ 0.86
CDC42EP1-201ENST00000249014 CDO1Q16878 200 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms