RNA–Protein interactions for RNA: ENST00000248553.6

HSPB1-201, Transcript of heat shock protein family B (small) member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPB1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPB1-201ENST00000248553 LAIR1Q6GTX8 287 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 CC2D1AQ6P1N0 951 aaPredicted RBP18.2■□□□□ 0.5
HSPB1-201ENST00000248553 DENND5BQ6ZUT9 1274 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 DGLUCYQ7Z3D6 616 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 SYNPOQ8N3V7 929 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 OR6B3Q8NGW1 331 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 SH3RF2Q8TEC5 729 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 OSCP1Q8WVF1 389 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 PAGE5Q96GU1 130 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 TTLL2Q9BWV7 592 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 ZNF518BQ9C0D4 1074 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 SDCBP2Q9H190 292 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 LINC00597Q9H2U6 94 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 SMYD3Q9H7B4 428 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 ECT2Q9H8V3 914 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 DUS2Q9NX74 493 aaKnown RBP18.2■□□□□ 0.5
HSPB1-201ENST00000248553 GMEB2Q9UKD1 530 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 USP18Q9UMW8 372 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 ZDHHC9Q9Y397 364 aa18.2■□□□□ 0.5
HSPB1-201ENST00000248553 LRRIQ3A6PVS8 624 aaPredicted RBP18.19■□□□□ 0.5
HSPB1-201ENST00000248553 EXOC3O60645 756 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 RNF40O75150 1001 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 VNN1O95497 513 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 STAU1O95793 577 aaKnown RBP18.19■□□□□ 0.5
HSPB1-201ENST00000248553 SLFN14P0C7P3 912 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 PTPN1P18031 435 aaKnown RBP18.19■□□□□ 0.5
HSPB1-201ENST00000248553 RAP1GAPP47736 663 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 CDH8P55286 799 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 PDGFRLQ15198 375 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 PARD3BQ8TEW8 1205 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 B3GNT5Q9BYG0 378 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 SNX25Q9H3E2 840 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 NXF1Q9UBU9 619 aaKnown RBP18.19■□□□□ 0.5
HSPB1-201ENST00000248553 ARHGAP26Q9UNA1 814 aa18.19■□□□□ 0.5
HSPB1-201ENST00000248553 A0A1B0GVL5 298 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 TCF3P15923 654 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 PFKFB1P16118 471 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 HDCP19113 662 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 HOXA6P31267 233 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 IFNAR2P48551 515 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 TNNC1P63316 161 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 DLG4P78352 724 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 GRSF1Q12849 480 aaKnown RBP eCLIP18.18■□□□□ 0.5
HSPB1-201ENST00000248553 KCNB1Q14721 858 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 MAPRE1Q15691 268 aaKnown RBP18.18■□□□□ 0.5
HSPB1-201ENST00000248553 GAB4Q2WGN9 574 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 KMT5BQ4FZB7 885 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 WDR5BQ86VZ2 330 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
HSPB1-201ENST00000248553 C8orf48Q96LL4 319 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 P2RY13Q9BPV8 354 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 RNF38Q9H0F5 515 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 KCTD10Q9H3F6 313 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 DMAC2Q9NW81 257 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 CGNQ9P2M7 1197 aaKnown RBP18.18■□□□□ 0.5
HSPB1-201ENST00000248553 RAB23Q9ULC3 237 aa18.18■□□□□ 0.5
HSPB1-201ENST00000248553 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.18■□□□□ 0.5
HSPB1-201ENST00000248553 ZNF840PA6NDX5 716 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 SCAMP3O14828 347 aaKnown RBP18.17■□□□□ 0.5
HSPB1-201ENST00000248553 TRIM66O15016 1216 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 C4BPAP04003 597 aaKnown RBP18.17■□□□□ 0.5
HSPB1-201ENST00000248553 PRR29P0C7W0 189 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 ANXA13P27216 316 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 NOP14P78316 857 aaKnown RBP18.17■□□□□ 0.5
HSPB1-201ENST00000248553 CLDN10P78369 228 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 TRPC3Q13507 836 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 SCARA5Q6ZMJ2 495 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 PAQR9Q6ZVX9 377 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 CEP57L1Q8IYX8 460 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 CPA6Q8N4T0 437 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 FAM160A2Q8N612 972 aaPredicted RBP18.17■□□□□ 0.5
HSPB1-201ENST00000248553 FSIP1Q8NA03 581 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 B3GALNT2Q8NCR0 500 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 CFAP45Q9UL16 551 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 HPSEQ9Y251 543 aa18.17■□□□□ 0.5
HSPB1-201ENST00000248553 A8MXQ7 604 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 LEFTY2O00292 366 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 OLFM2O95897 454 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 RETP07949 1114 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 ATXN1P54253 815 aaKnown RBP18.16■□□□□ 0.5
HSPB1-201ENST00000248553 LMNB2Q03252 620 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 IFRD2Q12894 506 aaPredicted RBP18.16■□□□□ 0.5
HSPB1-201ENST00000248553 TAF10Q12962 218 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 BIRC3Q13489 604 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 C1orf220Q5T0J3 134 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.16■□□□□ 0.5
HSPB1-201ENST00000248553 GPR161Q8N6U8 529 aaKnown RBP18.16■□□□□ 0.5
HSPB1-201ENST00000248553 ATP2A3Q93084 1043 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 CEP295NLQ96MC4 621 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 HHIPQ96QV1 700 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 VRTNQ9H8Y1 702 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 EXOC1Q9NV70 894 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 TRPM5Q9NZQ8 1165 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 HMGXB4Q9UGU5 601 aa18.16■□□□□ 0.5
HSPB1-201ENST00000248553 MYO18AQ92614 2054 aaKnown RBP18.16■□□□□ 0.5
HSPB1-201ENST00000248553 NUP205Q92621 2012 aa18.15■□□□□ 0.5
HSPB1-201ENST00000248553 PHACTR2O75167 634 aa18.15■□□□□ 0.5
HSPB1-201ENST00000248553 OAS1P00973 400 aaKnown RBP18.15■□□□□ 0.5
HSPB1-201ENST00000248553 FAM163BP0C2L3 166 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms